Gene Caci_4701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4701 
Symbol 
ID8336055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5358712 
End bp5359938 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content71% 
IMG OID644957801 
Productsodium/hydrogen exchanger 
Protein accessionYP_003115403 
Protein GI256393839 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.626984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCC TGATCGTCGC CGGCCTGGCC GTGATGCTGG CGTGGACCTT CGCCGCACGC 
CGGCTGGCCC GGTGGCACGT CTCCGGTCCG CTGTTCATGG TGGCCGGCGG CGTGGTCGCG
GGGCTCGCCG GCGGGACCGG CTTCGCCGCG CGGCTGGACA CGCACATCGC GGAGCGAGTC
GTCGAGCTGG TGCTCGCCGT CCTGCTGTTC GTGGATGCCA CGGTGGTGCG CGACGGGTTC
CTGGCCGGGG AGCGGGGCGC GGTGGTGCGG CTGCTGTTCC TCGCACTGCC GCTGATGGTG
GCCGCGACCT TCCTCGTCGG GCTGCCGCTG CTGCCCACGC CGTCGTGGGC GGTGGTGTTC
GTGGTGGCCT GCGTGGTGCT GCCGCTGGAC TTCGCCACCG CGCCGCACCT GCTCAAGGAC
CGCAACCTGC CGCTGTGGGT GCGGCACGTC CTGACGATCG AGAGCGGCTA CAACGACGGC
TTGTTCTCCC CCGCCTTCGC CTTCGCGATC CTGCTGATCG GCGAGTCGGG GCACGGCGGC
TCGCCGGAGG ACGCGCTGGG CCAGGCGTTC CCGGCTGCGG CGTACGCGGT GCTGGTCGGC
GTCGGCTTCG GCACGGTCAC CGGCACGGCG CTGCGTCGTG CGGAGCGTAA GAGCTGGTCG
AGCTCTGAGT CGGGGGGCAT CGCGGCGCTG CTGCTGCCGG TGGTCACCTA CTCGATCGCG
GTGTCGGTCG GCGGCAACGG GTTCGTGGCC GCGTTCCTGG CCGGCATTTC CTACAAGCGC
GCCCGAATTG GCTTCCGCGG CGAGCAGGCT CAGCTGCCGG AATCAGAGTT CGCGAACGTC
GAGGCCCTGG GCACGGTCGC CTCACTGATC GTGTGGTTCG TCTTCGGCGC GGTCGCGGTC
CTGGTGTTCG AGGACGGCGT CCCCGCCTCG GTGATCCTGT ACAGCATCCT GGTACTGACG
ATCGTGCGCA TGCTCCCGGT ATACGCCGCG ATGCTCGGCA CCAGCGCGAC CCTCCTCGAC
CGCACCCTCC TCGGCCTGGT CGGCCCACGC GGCACCACCT CGATCGTCTT CGGACTCCTC
GCCTACAACG CCACCCGCGA CGAGGACGCC GACCTGACCC TGTCCACGAT GACGATCGTC
CTCCTCGGCA GCCTGCTGCT GCACGGCGTC GCAGTGCCGC TGGCCGCCCA ACGACTCCGC
TCCGCCAACG GCGCCTCAGT AGACTGA
 
Protein sequence
MRLLIVAGLA VMLAWTFAAR RLARWHVSGP LFMVAGGVVA GLAGGTGFAA RLDTHIAERV 
VELVLAVLLF VDATVVRDGF LAGERGAVVR LLFLALPLMV AATFLVGLPL LPTPSWAVVF
VVACVVLPLD FATAPHLLKD RNLPLWVRHV LTIESGYNDG LFSPAFAFAI LLIGESGHGG
SPEDALGQAF PAAAYAVLVG VGFGTVTGTA LRRAERKSWS SSESGGIAAL LLPVVTYSIA
VSVGGNGFVA AFLAGISYKR ARIGFRGEQA QLPESEFANV EALGTVASLI VWFVFGAVAV
LVFEDGVPAS VILYSILVLT IVRMLPVYAA MLGTSATLLD RTLLGLVGPR GTTSIVFGLL
AYNATRDEDA DLTLSTMTIV LLGSLLLHGV AVPLAAQRLR SANGASVD