Gene Caci_4674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4674 
Symbol 
ID8336028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5323172 
End bp5323573 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content69% 
IMG OID644957774 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003115376 
Protein GI256393812 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.591353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAAG GCGAGCAGCT CACCCAGACC GATGCCGGGG CACGCTATGA CGTGTTTCAC 
ACCGACTGCG CCGCGCGCGC CGTGGTCGAC CACGTCACCA GCAGGTGGGG TGTCTGGGTG
CTGATCGCCC TGCAGAAACA CGACCTGCGC TTCTTCGAGC TGCGCGAAAG CATCGAGGGC
ATCAGCGAGA AGATGCTGGC GCAGTCCCTG CGCGCCCTGG TCCAGGACGG CCTGGTCTGG
CGGCACGTCG AACCGGCGAC GCCGCCCCAG GTCACCTACG GGCTCACCGA CTTCGGCCGG
GACGTCGGCG AGCCTTTGGC CGAACTGTTC TGCCGGATCA CCCGGCGGTC GCCGGCGGAC
AGCCCCGCCG AGCGCCGGCT GGCCCTGACG AGCACCGACT AA
 
Protein sequence
MIEGEQLTQT DAGARYDVFH TDCAARAVVD HVTSRWGVWV LIALQKHDLR FFELRESIEG 
ISEKMLAQSL RALVQDGLVW RHVEPATPPQ VTYGLTDFGR DVGEPLAELF CRITRRSPAD
SPAERRLALT STD