Gene Caci_4648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4648 
Symbol 
ID8336002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5285486 
End bp5286328 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content67% 
IMG OID644957748 
Productbeta-lactamase domain protein 
Protein accessionYP_003115350 
Protein GI256393786 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.197699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.411679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC ATCACTTGAA CTGCGGGTCG GTCCGGGAGA TCGAGCGCAC CTATGAAGGG 
CCGGCGGCGG CGCATGCGGT GAACCACTGT CTGCTGCTGG AGACCGATGG CGATGGGTTG
GTGCTGGTGG AGACGGGGTT GGGGCTCGTT GACATCGCTG ATCCAGACGG GGTGCTCGGT
GCTGGGTGGG TTAAGGCATC GCAGCCTGTG TTGGCGGAGC AGGAGACTGC GATTCGGCAG
GTCGAAGGGC TTGGGTTCGG TGCCGGGGAT GTGCGGCACA TCTTCCTCAG CCACTTGGAC
GTCGACCACT GCGGTGGGCT GCCGGACTTC CCCGAGGCGC AGGTTCACCT GCTGCGTGCC
GAGCTGGAGG CCGCGCTGGC GCAGGCGCCG AGTGCCCGCT ACCGGCCTGC GCACTGGGAG
CACGGGCCGA AGTGGGTTCA GTATGCGCCC GAGGCCAATG ATCAGTGGTT CGGGTTCAGC
GCGCAGCAGG CCGAGGGGTT GTCGGAGGAG ATCCTGATGG TTCCGCTCGG CGGTCACACC
GAGGGACACA CCGGTATCGC CGTGCGCGAC GGCGACGACT GGCTGCTGCA CTGCGGCGAT
GCCTACTACT ACCACCGCGA ACTCGACGAC GAGCCGGAAC CGCATCCGCT GCTCAACTGG
GTGCAGACCA CGTACGAGAC CCACCACGAC CTGCGGCTCG GCACCCAGGC CCGGCTACGC
GAACTGGTCC GCGCCCACGG TGACCAGGTC ACGCTCATCG CCGCGCACGA CCCGTGGGAG
TTCGCGCGCC TCCAGCAGCT CCAGCAGCCG CGGGGCAGCG AGCGCCGCGT TGCGAAAATA
TAG
 
Protein sequence
MKIHHLNCGS VREIERTYEG PAAAHAVNHC LLLETDGDGL VLVETGLGLV DIADPDGVLG 
AGWVKASQPV LAEQETAIRQ VEGLGFGAGD VRHIFLSHLD VDHCGGLPDF PEAQVHLLRA
ELEAALAQAP SARYRPAHWE HGPKWVQYAP EANDQWFGFS AQQAEGLSEE ILMVPLGGHT
EGHTGIAVRD GDDWLLHCGD AYYYHRELDD EPEPHPLLNW VQTTYETHHD LRLGTQARLR
ELVRAHGDQV TLIAAHDPWE FARLQQLQQP RGSERRVAKI