| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4643 |
|---|
| Symbol | |
|---|
| ID | 8335997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5280615 |
|---|
| End bp | 5282171 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644957743 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003115345 |
|---|
| Protein GI | 256393781 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.39122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.263686 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGCGGG AGTTTGCGGG TGAGGGGTCC TTTGGTGGTG GGCTGGGGCG GGTGGTGATG
CTTGTGGGGA ATTTTGTGGA TGGTGATTCG CGGGTGCAGA AGGAGGCTCG GTCGGCGGCG
GCTGGGGGGT GGGAGACGTT TTTGGTTGGG CGGTCGCCTG GTGGGGGGCG TGAGGAGTAT
GGGCTGGGTG GGGCGACTGT TGTTCGCGCG GCTGAGGTGA TGACGGCGAC GCGGTATCGG
GCGTCGCATC CGCGGCGGGG GGTGGGTGGG TTCTTTGCTT ATCGGTCGCG GGAGGTCAGC
AGGGTGAAGC ATCGGCGGCA GCGGATGCGG CAGGAGAACA GTGCGATGGA GCGGGAGCGG
CTGGAGCAGC GGCTGGCGTC TGGTTCGGTT AGTCCGATCA TTGCGGCTGG GTTGCGGTCG
GACTATGCCG TCCGCGCTGC TGCGACTCGC GGTCTCGGCT ACTGGGTGGC GGCTCGCAAG
CAGGCGTTTG ATCGCAACGT CGCGCGCAGC AAAACTGATC CGAACAGTGG TCTGCGCCTG
TTGTTGGCCC GGATCGGCGG CGACTCTCCG GCGTGGGATG CCCAGCCGCG GCTGGTCGAC
TTCGAGGATT CCTTCGGTCC AGTCATCGAC GAGCTGGAGC CGGACCTCAT CCACGCCAAC
GACGCGGACA TGCTGGGTGT CGCAGCCCGC GCGGTGGTGC GGGCCCGCTC CAGAGGCCGC
GACGTCAAGC TGGTCTACGA CGCCCACGAG TTCTTCCCCG GCGAGATCCG GCACGGCGAC
GCCAGCTGGC ATGTCGTCAT GGCCGGCGAG GAACGCCGCT ATCTGCCGCT GGTCGACGGT
GTCTGTGCGG CGGCGGAGCA CATCGCCACC GCGATGGCCG AGTGTTATCA GCTCTCGACG
GTGCCGACCG TGGTCAACAA CATGCCCGAA CGCTCGACGC TGGTCGGCGT GGGCGAGGAA
GTGCCGGGTG TCCGCGGTGA CTTGGAGCTG GACGCCGACG TGCCCCTGAT CGTGCACGCG
GGCATGGTCG CGCCGGTCCG CGGTCTGGAT GCGATCGTGC GGGCGCTGGC GGAGCCGGGA
ATGAGCCACG CGCACTTCGC CATGCTCGTC GGCTCGCGCC AAGGGCATGT GGCTGACCTG
GTAGGTCTGG CGGAATCGCT GGACTGCGGG GAGCGCCTGC ACCTGCTCGA CTACGTGCCG
GTCCAGGAGC TGACGGCGTA TCTGGCCACT GCAACAGTGG GCGTGGAGCC GTTCCTGCAC
ACTCCGCACC AGGAATTGAC CGTCACAACG AAGTTCTGGT CGTACCTGAA CGCGCGGCTG
CCGATCGTGG TCAGCGACGT GAAAGCCATG TCAGGCCTTG TCGGCGAGAT GGGAAACGGC
GAGGTGTTCG TGGCAGGTGA CGCTCAAAGC GCCGCGGCGG CGCTGCGGAA GGTATTCGAG
AACCGGGAAC GGTACACCGC CGTCTACGAA GCCGACGGAC CCGAGGCGAC GCGATTCACC
TGGGAGCCAC AGGCCGAGAG AATGCTGGCT CTGTACCAGG CGGTCATGCA CGCCTGA
|
|---|
| Protein sequence | MLREFAGEGS FGGGLGRVVM LVGNFVDGDS RVQKEARSAA AGGWETFLVG RSPGGGREEY
GLGGATVVRA AEVMTATRYR ASHPRRGVGG FFAYRSREVS RVKHRRQRMR QENSAMERER
LEQRLASGSV SPIIAAGLRS DYAVRAAATR GLGYWVAARK QAFDRNVARS KTDPNSGLRL
LLARIGGDSP AWDAQPRLVD FEDSFGPVID ELEPDLIHAN DADMLGVAAR AVVRARSRGR
DVKLVYDAHE FFPGEIRHGD ASWHVVMAGE ERRYLPLVDG VCAAAEHIAT AMAECYQLST
VPTVVNNMPE RSTLVGVGEE VPGVRGDLEL DADVPLIVHA GMVAPVRGLD AIVRALAEPG
MSHAHFAMLV GSRQGHVADL VGLAESLDCG ERLHLLDYVP VQELTAYLAT ATVGVEPFLH
TPHQELTVTT KFWSYLNARL PIVVSDVKAM SGLVGEMGNG EVFVAGDAQS AAAALRKVFE
NRERYTAVYE ADGPEATRFT WEPQAERMLA LYQAVMHA
|
|---|
| |