| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4641 |
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| Symbol | |
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| ID | 8335995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5277274 |
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| End bp | 5278998 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957741 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003115343 |
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| Protein GI | 256393779 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0200277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.347937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACGC CCCGCCCCAC GCCCCGCCGG TTCGCTGTCG CCGCCCTGGC CTGCACTCTG
GCAGCTCTAC CCCTGACATC CAGCACCGCT CACGCGACGC CAACGCCACC GCCCTCAACA
GCCCACACGG CCACCGCTGC CAGTACTGCC GCCACCCTGG CCGCCACACC CCCGATGGGC
TGGAACGACT GGGCCCACTA CCAGTGCTCC GTCGACGAAT CCACGGTCGT CGCGAACGCC
AACGCGCTCG TCAGCAGCGG CCTGGCCGCC AAGGGCTACA AGACCGTCAC GGTCGACGAC
TGCTGGATGG CCTCCTCCCG CGACTCCGGC GGCACCCTGG TCGCCAACTC CACGAAGTTC
CCCCACGGCA TGGCCTGGCT CGGCAGCTAC CTGCACAGCA AAGGCCTGAA CTTCGGCATC
TACGAAGACG CCGGCTCCTC CACCTGCGGC GGCTATCCCG GCAGCGGCCA ACCCCAAGGC
GGCGGCGCGG ACCACTTCGC GCATGACGCC GCGACCTTCG CCTCCTGGGG TGTGGACTAC
CTGAAGCTCG ACGGCTGCAA CGTCTACATC CCGAGCGGGG AAAGCACCGA GCAGGCGTAC
CACAACGCCT ACACCGCCGA GTCGACCGCG CTGGCGAACG CCGGCCGCCC GATCGTGTTC
TCCGAGTCCG CGCCCGCGTA CTTCCAGAGC GGCGAGTGGG GCAATCCCAC CTGGTTCGAC
GTCCTGGGCT GGGTCGGCCA GCTCGGGCAG CTGTGGCGCG AAGGGTACGA CATCGCCACG
TACAACAGCG GCAACCCCAC CGCCAGCCGC TGGTCCTCGG TGATGTCCAA CTACGGCTAC
AACCGCTGGA TCGCCCGCTA CGCCCACCCC GGCAACTGGA ACGACCCCGA CTTCCTCATC
GCCGGCGACC CTGGCCTGAC CGCTGAGGAG TCCCGCAGCC AGGTCGCCTT GTGGGCGATG
ATGAACGCCC CGATGATCCT GTCCTCGGAC GTCGCCAACC TCAGCGCCGA CGGCCTGGCC
GCCCTGGGCA ACACCGACCT GATCGCCCTG GACCAGGACA GCGCGGGCCG CCAGGCAGGC
GTGGTCTCCA CCAACGGCAC CACCGACGTC CTGGCCAAGC CGCTGGCCAA CGGCGACCGC
GCCGTAGCGG TCCTGAACCG CGGCAGCGCG TCGCAGAACG TGTCGACCAC CCTGGCCTCG
ATCGGCCTGC CCAACTGCAC GGCCAGCGCC AAGAACCTGT GGACCGGCAC CACCACGACC
AGCAGCACCC TGACCGCGAC CATCCCCGCC CACGGCACCG CCATCTGGCG CCTGGCCCCC
TCCGCCGGCT GCGCAGCCGC AGTGCCGACC GGCGAGATCG TCGGCAACGG CGCCAAGTGC
GTGGACGTCA CCGGCAGCGG CACCGCCAAC GGCACGGCGG CGATCCTGTA CACCTGCACC
GGCAACGCGA ACCAGTCCTG GACGCGCCCC GGCAACAGCA GCATCCAGAC CCTCGGCAAG
TGCCTCACTG CCAACGGCAC CACGGCGGGC AGCACGGTCG TGATCTCCGC CTGCATCGGC
GCCAGTGCAC AGCAGTGGAC GGCGCAGGCT GACGGGACGG TCGCGAACGG CGCGTCCGGC
CTGTGCCTGG ACGTCTACGG CGGCGGCAGC GCCGACGGCA CGAAGCTGGA CACCTGGACG
TGCGGCAGCC ACCAGGCGAA CCAGACCTGG GCGATGCCGA GCTGA
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| Protein sequence | MSTPRPTPRR FAVAALACTL AALPLTSSTA HATPTPPPST AHTATAASTA ATLAATPPMG
WNDWAHYQCS VDESTVVANA NALVSSGLAA KGYKTVTVDD CWMASSRDSG GTLVANSTKF
PHGMAWLGSY LHSKGLNFGI YEDAGSSTCG GYPGSGQPQG GGADHFAHDA ATFASWGVDY
LKLDGCNVYI PSGESTEQAY HNAYTAESTA LANAGRPIVF SESAPAYFQS GEWGNPTWFD
VLGWVGQLGQ LWREGYDIAT YNSGNPTASR WSSVMSNYGY NRWIARYAHP GNWNDPDFLI
AGDPGLTAEE SRSQVALWAM MNAPMILSSD VANLSADGLA ALGNTDLIAL DQDSAGRQAG
VVSTNGTTDV LAKPLANGDR AVAVLNRGSA SQNVSTTLAS IGLPNCTASA KNLWTGTTTT
SSTLTATIPA HGTAIWRLAP SAGCAAAVPT GEIVGNGAKC VDVTGSGTAN GTAAILYTCT
GNANQSWTRP GNSSIQTLGK CLTANGTTAG STVVISACIG ASAQQWTAQA DGTVANGASG
LCLDVYGGGS ADGTKLDTWT CGSHQANQTW AMPS
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