Gene Caci_4630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4630 
Symbol 
ID8335984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5267489 
End bp5268250 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content74% 
IMG OID644957730 
Productprotein of unknown function DUF833 
Protein accessionYP_003115332 
Protein GI256393768 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.057436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGTCG AGCCCTCCTC GGAGTACCCG GTTGTGCTGG CCGGGGTGCG TGATGAGTTC 
CACGACCGGC CGTGGATCCC GCCGGGCCGG CACTGGCCGC GGTATCCGCG CCTGATCGGC
GGGCAGGATC TGCTGGCTTC CGGGACGTGG CTGGCGGTGG ATCCGGACGC CTGCCGCGTG
GCGTGCGTGC TCAACGGCCG CGGTCCCCTG GCGCCGGAGG CCGGGCGGCG CTCGCGCGGG
GATCTGCCGC TGCGGTTCGC CGCCGCCGGC GCCGGCGAGG ACATGGAACG GTTGGACTTC
ACCCGCTACG ACCCGTTCCA TCTGATCTGC GCGACGGTGC GTGAGGTGTT TCTGCTCAGC
TGGGACGGCG AGCAGCATCA GCGGCAGGAT TTGGCGGCGG GTCTGCACGT GGTGGTGAAC
AGCGGCCTAG AGGGAACCGA TCCGACGGAC GGGCCCGGAA CCGAGGCGAT GGCGGCGCGG
CTGGGGTTCT TCCGGCCGCG GCTGCTGACC GCGCGGCGTC CGCAGCCGGC GCCGAAGGTG
GCGACGCGGC AGGCGTGGGA GCCGTGGCTG CCGCTGCTGG AGGGCGGCGG GCTGGATCCG
CTGGACGACC GGGCGCTGCT GGTGCGGCGC GAATTCGGCG AGCGGACCTG GGGCACGACG
TCGGTGTCGC TGGTGGCGCT GCGGGCTTCC GGCGGGGTGC GGTACGACTT CAGCGGGACG
CCGGGGGACC CGGCAGCCTG GTCGCCGGTG GTGCAGGACT GA
 
Protein sequence
MSVEPSSEYP VVLAGVRDEF HDRPWIPPGR HWPRYPRLIG GQDLLASGTW LAVDPDACRV 
ACVLNGRGPL APEAGRRSRG DLPLRFAAAG AGEDMERLDF TRYDPFHLIC ATVREVFLLS
WDGEQHQRQD LAAGLHVVVN SGLEGTDPTD GPGTEAMAAR LGFFRPRLLT ARRPQPAPKV
ATRQAWEPWL PLLEGGGLDP LDDRALLVRR EFGERTWGTT SVSLVALRAS GGVRYDFSGT
PGDPAAWSPV VQD