| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4624 |
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| Symbol | |
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| ID | 8335978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5261098 |
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| End bp | 5262159 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644957724 |
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| Product | integrase family protein |
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| Protein accession | YP_003115326 |
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| Protein GI | 256393762 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0157087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00236939 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCCGCGC CGAAACCGTT CACCCCGATC TCCGTCGCCG AAGCGGTCCA CCGCTACCGC
GACACCCTGC ACCTGCGCGT GGCCACCGGG GCGATGTCCC CGGCCACCCG CGACGCCTAC
GTGCGGGACC TCACCGAAGC CGCCACCCTG CTGGGCCTGG ACAAAGCCCT GGACGACGTC
GAAGCCGAAG ACGTCGAATA CGCCCTGGTG CGCATCGCCA ACGCCCCCGA CCGCCGCTAC
ACCCGCACCC GCAAAGCCGG ACCCGGCGGC GAACCCGCCC CCGGCCGCGG CCTGCAAGCC
CGCGCCCGCT GGACCGCCGC CGTGCGCGGC CTTTTCGCCT GGGCCGCCGA ACAGGGCTAC
GTCCGCGCCG ACCCCATGCC GCACGTCTCC CGCGTCCGCG TCCCCACCCG AGCCGTCGGC
GCGCGCCTGG GCCTGACGGT GGAGCAGGCG CAGGCGCTGC AGGAGACGCC GGCGGTCGCG
GCCTCCCGCA GTGAGTTGCG GGCCGATCAG CGTCTGACGA TCCGCGACGA GGTGATCCTG
CGGCTGCTGA CCGAGACCGG GCCGCGGGTG GCGGAGGTGT GTGCGGCGAA CCTGGACGAT
GTGCGGCAGC ACGAGCTGAC CGGGATGCCG GTGCTGCGGA TCCGGGCCGG CAAAGGCGGG
CGCAGCCGGG ATGTGCCGCT GTCGCAGACG CTGGTGAGCA TGCTTGAGCA GTATCAGCAG
CATGAGAGGC CCGCTCCCCC GGCCGGCGAC GCCGAAGCCG ACCGCTCTGA TGCGGCGCGC
GCCTTGCTGG TGACGATCCG GGGGCGGCGG ATGACCGCTC GCGATGTGCA GCGGATGGTG
GAGCGGCGGG TGAAGCAGAT GCCCGCGCAG CTGCGGCGGG CGGTGACGCC GCACGGTCTG
CGGCACACCG CGGCCACGGT GTTGCTGCGT CAGGCCGGCG CCGACGTGGG GACCGTCGCC
GACATCCTGG GGCACGCCGA TGTCGGGACG ACCTCGGTGT ATCTGGATCC GTCGGCGACG
GCCGCGGCGC AGGCTCTTCA GCGCTCGCCG CTGGCGCAGT AG
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| Protein sequence | MAAPKPFTPI SVAEAVHRYR DTLHLRVATG AMSPATRDAY VRDLTEAATL LGLDKALDDV
EAEDVEYALV RIANAPDRRY TRTRKAGPGG EPAPGRGLQA RARWTAAVRG LFAWAAEQGY
VRADPMPHVS RVRVPTRAVG ARLGLTVEQA QALQETPAVA ASRSELRADQ RLTIRDEVIL
RLLTETGPRV AEVCAANLDD VRQHELTGMP VLRIRAGKGG RSRDVPLSQT LVSMLEQYQQ
HERPAPPAGD AEADRSDAAR ALLVTIRGRR MTARDVQRMV ERRVKQMPAQ LRRAVTPHGL
RHTAATVLLR QAGADVGTVA DILGHADVGT TSVYLDPSAT AAAQALQRSP LAQ
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