Gene Caci_4613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4613 
Symbol 
ID8335967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5249979 
End bp5250827 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content67% 
IMG OID644957713 
ProductMethyltransferase type 11 
Protein accessionYP_003115315 
Protein GI256393751 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000005749 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGTTCGC AGTCTGCTGT CACCAGCCGC TACCAGGAGT CTGTCGCCGA CTACTGGGAC 
CGGGAGAAAA ACCCGGTGAA CATCCGCTTA GGCGAGGTGG ACGGTATCTA CCACCACCAC
TACGGCATCG GCGACGTCGA CTGGTCGGTG CTGCAGGCGC CGGCCGACGA CCGGGAGGCG
CGCGTCATCG CCGAGATGCA CCGGTTGGAG ACGGCGCAGG CCGAGTTCCT GCTGGACCAG
CTCGGTCCGG TCACCGCCGA GCAGCGGCTG CTGGACGCCG GGTCCGGCCG CGGCGGCACG
TCGCTGATGG CCTCGCTGCG GTTCGGCTGC CGCGTCGACG GGCTGTCGAT CTCCGGCAAG
CAGGTCGACT TCGCCAACAA CCGCGCCGAG CAGATGGGCC TGTCGGGGAA GGTGAACTAC
CACCTGCGCA ACATGCTGGA CAACGGCTTC GCCGACGGCA CGTTCCAGGC GATCTGGAAC
AACGAGTCGA CGATGTACGT GGACTTGCAC TCGCTGTTCG CCGAGCACGC GCGCTCCCTG
GCGCCGGGCG GGCGGTACGT CACTATCACC GGCTGCTTCA ACGACGCCTA CGGGGCGCTG
CCGTCGCGGT CGGTGAGCCA GATCAACGCG CACTACATCT GCGACATCCA TCCGCGCTCG
GAGTACTTCG CGGCGATGGT CGAAAACGGC CTGGTCCCGA TCAGCGTGGT GGACCTGACG
GCGGCGACGA TCCCGTACTG GGAGCTGCGG GAGCAGTCGA ACGTGACGAC CGGGATCGAG
GAGGCGTTCC TGACCGCGTA CAAGGAGGGC AGCTTCCACT ACCTGATGAT CGCCGCCGAC
AAGGTCTGA
 
Protein sequence
MGSQSAVTSR YQESVADYWD REKNPVNIRL GEVDGIYHHH YGIGDVDWSV LQAPADDREA 
RVIAEMHRLE TAQAEFLLDQ LGPVTAEQRL LDAGSGRGGT SLMASLRFGC RVDGLSISGK
QVDFANNRAE QMGLSGKVNY HLRNMLDNGF ADGTFQAIWN NESTMYVDLH SLFAEHARSL
APGGRYVTIT GCFNDAYGAL PSRSVSQINA HYICDIHPRS EYFAAMVENG LVPISVVDLT
AATIPYWELR EQSNVTTGIE EAFLTAYKEG SFHYLMIAAD KV