Gene Caci_4586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4586 
Symbol 
ID8335940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5217559 
End bp5218734 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content72% 
IMG OID644957687 
Producthypothetical protein 
Protein accessionYP_003115289 
Protein GI256393725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.48591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0398541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATCT CCGAACTGAC GCCCGAAACC CTGGCCACGC TGCGTTCGCC GCGTCCTTAT 
CCGGCGGTGA CGATGGTCAT GCCGGTCGAT CCGAAGGCGC CCTTCAGTGA GAAGGACCGC
ATTCTGCTGC GCGGGTTGTG CACCGAGGCG CAGCGGCAGC TCGCTGAGGA TGCCGAGGTC
GAGCGGGAGG TGCGGCTGGC GCTGCGGGAT GGGAAGCTGT CGCCGGAGGC TGTCGCGGAG
CTGGTGGATC CGGGTGTGCC GGCCGGTGAG CTGGTCGTCT ACGTCAGTGC GGCGAATCCG
ACGCAGGTCT GGCAGGTGCC GACGGATGCC GAGGTGCTGC CGCGGGTGGA GTTCGCCGAC
CGGTATCTGA CGCGCTACCT GGCCGCCGCC GAGCAGCGTT CGTGGCCGTA CCTGGTGCTG
GTGCTGGACC AGGAGATGTG CCGGCTGTAC CGGGGCGCGG CGTCGCGGCT GCGGGAGGTG
AAGGAGCACG GCTTCCCCGA CGCGCCGGCC ATCCCCTCGC CGGAGGACGC GGTACCCGGG
CCCATCCCGC GCGCGCAGCC GTACGAGGCG CACGAGGAGT ACGTGAAGCA GTACTTGCGC
ACCGTCGACA AGAACCTCGG CCGCGCCCTG AAGGCCCACG ACGGCCTCCC GCTGTTCGTC
ATCGGCGGCG ACAAGATCCT CGCGGCGTTC CTGGACCTCA CCGGCCACCA CGACGTGGTC
GCCGGCACCC TGCCCCTGAC CGGCATGGAC AAGGACACCC CTTCCGACCT GGCCAAGCGC
GTCGCACCGG CGGTCGAGGC CTACCGCGCC GAGCAGGTCG CCGCAGCCGT AACGGAGCTG
CAGGACGCCC GCTCCCAGAA CAAGTACGCC GGCGGCCCGG CCGAGGTCTG GACCGCGACC
GCCGACAAGC GCGTCCAGCG CCTCCTCGTC GAGGAGGGCC TGCTGATCGC CGGCAGAATC
GGCGGCGACG GCCGCGACCT GGCCACCGTC CCCTACCCCG AACCGGTCAC CCTGCCGCAG
CCGAAGGAGG ACTTCGAGCC GCCGGAGCCC GGCGTCGACA CCGACATCGT CGAGCAGCTG
GTCGAGAACG CCGTGGAGAG CGGCGCGCAG ATCCTGTTCG TGCCGGACGG GACGCTGGCG
GACGCCGCGG GGGTGGCGGC GGCGCTGCGG TACTGA
 
Protein sequence
MDISELTPET LATLRSPRPY PAVTMVMPVD PKAPFSEKDR ILLRGLCTEA QRQLAEDAEV 
EREVRLALRD GKLSPEAVAE LVDPGVPAGE LVVYVSAANP TQVWQVPTDA EVLPRVEFAD
RYLTRYLAAA EQRSWPYLVL VLDQEMCRLY RGAASRLREV KEHGFPDAPA IPSPEDAVPG
PIPRAQPYEA HEEYVKQYLR TVDKNLGRAL KAHDGLPLFV IGGDKILAAF LDLTGHHDVV
AGTLPLTGMD KDTPSDLAKR VAPAVEAYRA EQVAAAVTEL QDARSQNKYA GGPAEVWTAT
ADKRVQRLLV EEGLLIAGRI GGDGRDLATV PYPEPVTLPQ PKEDFEPPEP GVDTDIVEQL
VENAVESGAQ ILFVPDGTLA DAAGVAAALR Y