Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4586 |
Symbol | |
ID | 8335940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5217559 |
End bp | 5218734 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644957687 |
Product | hypothetical protein |
Protein accession | YP_003115289 |
Protein GI | 256393725 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.48591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0398541 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGACATCT CCGAACTGAC GCCCGAAACC CTGGCCACGC TGCGTTCGCC GCGTCCTTAT CCGGCGGTGA CGATGGTCAT GCCGGTCGAT CCGAAGGCGC CCTTCAGTGA GAAGGACCGC ATTCTGCTGC GCGGGTTGTG CACCGAGGCG CAGCGGCAGC TCGCTGAGGA TGCCGAGGTC GAGCGGGAGG TGCGGCTGGC GCTGCGGGAT GGGAAGCTGT CGCCGGAGGC TGTCGCGGAG CTGGTGGATC CGGGTGTGCC GGCCGGTGAG CTGGTCGTCT ACGTCAGTGC GGCGAATCCG ACGCAGGTCT GGCAGGTGCC GACGGATGCC GAGGTGCTGC CGCGGGTGGA GTTCGCCGAC CGGTATCTGA CGCGCTACCT GGCCGCCGCC GAGCAGCGTT CGTGGCCGTA CCTGGTGCTG GTGCTGGACC AGGAGATGTG CCGGCTGTAC CGGGGCGCGG CGTCGCGGCT GCGGGAGGTG AAGGAGCACG GCTTCCCCGA CGCGCCGGCC ATCCCCTCGC CGGAGGACGC GGTACCCGGG CCCATCCCGC GCGCGCAGCC GTACGAGGCG CACGAGGAGT ACGTGAAGCA GTACTTGCGC ACCGTCGACA AGAACCTCGG CCGCGCCCTG AAGGCCCACG ACGGCCTCCC GCTGTTCGTC ATCGGCGGCG ACAAGATCCT CGCGGCGTTC CTGGACCTCA CCGGCCACCA CGACGTGGTC GCCGGCACCC TGCCCCTGAC CGGCATGGAC AAGGACACCC CTTCCGACCT GGCCAAGCGC GTCGCACCGG CGGTCGAGGC CTACCGCGCC GAGCAGGTCG CCGCAGCCGT AACGGAGCTG CAGGACGCCC GCTCCCAGAA CAAGTACGCC GGCGGCCCGG CCGAGGTCTG GACCGCGACC GCCGACAAGC GCGTCCAGCG CCTCCTCGTC GAGGAGGGCC TGCTGATCGC CGGCAGAATC GGCGGCGACG GCCGCGACCT GGCCACCGTC CCCTACCCCG AACCGGTCAC CCTGCCGCAG CCGAAGGAGG ACTTCGAGCC GCCGGAGCCC GGCGTCGACA CCGACATCGT CGAGCAGCTG GTCGAGAACG CCGTGGAGAG CGGCGCGCAG ATCCTGTTCG TGCCGGACGG GACGCTGGCG GACGCCGCGG GGGTGGCGGC GGCGCTGCGG TACTGA
|
Protein sequence | MDISELTPET LATLRSPRPY PAVTMVMPVD PKAPFSEKDR ILLRGLCTEA QRQLAEDAEV EREVRLALRD GKLSPEAVAE LVDPGVPAGE LVVYVSAANP TQVWQVPTDA EVLPRVEFAD RYLTRYLAAA EQRSWPYLVL VLDQEMCRLY RGAASRLREV KEHGFPDAPA IPSPEDAVPG PIPRAQPYEA HEEYVKQYLR TVDKNLGRAL KAHDGLPLFV IGGDKILAAF LDLTGHHDVV AGTLPLTGMD KDTPSDLAKR VAPAVEAYRA EQVAAAVTEL QDARSQNKYA GGPAEVWTAT ADKRVQRLLV EEGLLIAGRI GGDGRDLATV PYPEPVTLPQ PKEDFEPPEP GVDTDIVEQL VENAVESGAQ ILFVPDGTLA DAAGVAAALR Y
|
| |