| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4580 |
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| Symbol | |
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| ID | 8335934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5212697 |
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| End bp | 5214118 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644957681 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003115283 |
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| Protein GI | 256393719 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.259189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGCG CCGATCCGAT AGGACAGAGG ACGCGCGCCG AGCCGCAGGC TGCCGCCGCC
ACGCCGCTCC CCCGCGCGCT GCTGCTCATC GGCGTGGTTA TGGCGGTGGT CGGCAGCGTC
GGCGGGCCGC TGATCACGAG CGTCGCGACG ACGCTGCACG TCTCGCTCGC GGCGGCGCAG
TGGACGCTGA CCGTCTCGCT GCTCACCGGG GCGGTGGCGA CGCCGGTGCT CGGGCGGCTC
GGGTCCGGGG CGCGCCGGCG TCCGGTCGTG CTGGGCACGC TCGGTGTCAT CGTGGTCGGC
AGTGTCCTGA CGGTGCTGCC GCTGCCGCTC GGGCCGCTGC TGGTGGGGCG GGCGGCGCAG
GGGTGCGGGC TGGCGCTGGG ACCGCTGATG ATGGCCTCGG CGCGCGAGCA TCTGGACAAG
GCGCGGGCCG CCTCGACGAT CGCGATGATC TCGGTCGCCT CGACGGCGGG GGTCGGGTTC
GGGTATCCGC TCGCGGGCTA CCTCACCGAT GTCGGTGGCA TTCGGCTCGC CTATGCGGCC
GCGCTGGGAC TGTCGGCGGT GGCGTTCCTG GTGGCGTTCC GCTTCTTCCC CGCCTCGCAG
CAGCCTGTCG CTCCCGCGCC CGACGCGGCG GCGAGTCTGC TGCTCACCGC CGGGGTGCTG
GTGCTGTTGC TCGTCCTCGG TGAGGCGAGT CTGTGGCAGG ACCATCTGGC GGTGGCGGTC
GGCGGGGTCG TCGCGGCGCT GCTGCTCGTG GCGTGGACGC TGCGGGAACG CGCCCTGGTC
AATCCGCTGG TCGATCTGCG TCTGCTGCGA CACCGGGCGG TGGCCGGCGC GAACGCCGCG
ATGCTGGTGG CAGGTGTCGG AATGTATCTG CTGCTGTCGT GCATCACCCG GTACGTGCAG
ACTCCGCGCG TCGCCGGCTA CGGCTTCGGG CTGAGCACGT TCACCGCGGG CCTGTTCCTC
GTCCCGTTCT CGGTGGTCGG CTTCGTGGCG GGCCGCCTGA GCCCGCGGGT GCGCAGGTAT
CTGTCGGCGC CGGCGCTGGT CACGGCCGCG ACCGCGGTGG TGATCGGCGC GTTCGCGCTG
TTCGCCGTGG CGCGCGGGTC CATCGCCGGT CCGCTGGTGT CGATGACGCT GCTGGGCTTG
GGCGTCGGCG CCTTCTCCGC GGCGATGCCC GCGGTGATCC TGGAGGTGAC TCCGGCGCAG
GAGACGGCGA GCGCCATGGG CGTCAACCAG GTGGTGCGCA GCATCGGGTT CTCGCTCGGC
AGTACCCTGA GCGCCCTGCT CTTGGCCGCG CACACACCGG CGGGCGCCGT CTTCCCCACC
GACGAAGGCT TCACGGTGAC GGCGTGGATC GGCGCCGCCG TCACCGCGAT CGCCTTGGGG
ATCAGCTTTA CGCTGCGCCC GGAGTCGGAA CCGGAGCGGT GA
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| Protein sequence | MSGADPIGQR TRAEPQAAAA TPLPRALLLI GVVMAVVGSV GGPLITSVAT TLHVSLAAAQ
WTLTVSLLTG AVATPVLGRL GSGARRRPVV LGTLGVIVVG SVLTVLPLPL GPLLVGRAAQ
GCGLALGPLM MASAREHLDK ARAASTIAMI SVASTAGVGF GYPLAGYLTD VGGIRLAYAA
ALGLSAVAFL VAFRFFPASQ QPVAPAPDAA ASLLLTAGVL VLLLVLGEAS LWQDHLAVAV
GGVVAALLLV AWTLRERALV NPLVDLRLLR HRAVAGANAA MLVAGVGMYL LLSCITRYVQ
TPRVAGYGFG LSTFTAGLFL VPFSVVGFVA GRLSPRVRRY LSAPALVTAA TAVVIGAFAL
FAVARGSIAG PLVSMTLLGL GVGAFSAAMP AVILEVTPAQ ETASAMGVNQ VVRSIGFSLG
STLSALLLAA HTPAGAVFPT DEGFTVTAWI GAAVTAIALG ISFTLRPESE PER
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