| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4574 |
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| Symbol | |
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| ID | 8335928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5206841 |
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| End bp | 5207827 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644957675 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_003115277 |
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| Protein GI | 256393713 |
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| COG category | [K] Transcription |
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| COG ID | [COG1378] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.524309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.732921 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCGGC CCGCGAATAA GGGGACTGAC GTGCTGGAAT CAGTGGGCCT GCCAGAGCCG
TGCGGAACGG TGTACTCGGC CCTCGTTGAG CATCCCGAGT CCGGCGCGGC GCGGTTGGCG
GAGATCACGA GGCTACCGTT GAGTAAGGTG CGCGGCGCAC TCGACCGCTT GACCGCCGAG
GGCATGGCGA GCCGCGCGCC GGGCCGGACG GCGGTGTGGT TCGCCTCGGC GCCGGACGTC
GCCATCGGCT CGCTGGTCGG GCGTGCGGAG CAGGAGCTGG TGCGTGTCAG GTCCTTGATG
AACGGCCTCA TGGACAGCTA CCGCGAGGCG GCCCGCTACA CCGACCCCTC GCTGTCGGTG
GAGGTGGTGC GCGGTTATGA GGAGGTCGGC CGCCGCTTCA GCCACCTGCA GAGCGAGGCG
CGCCACCAGA TCCGCGGCTT CGACCGGCCG CCGTACCTGA ACAACCCCGG CACCAACCAC
GACAACGCGG CGCGCCGTGC CCGCTCCGGA CTGAACTACC GGGTGATCTA CTCCCGCGCC
GCGCTGGCCT GGCCGGACCG TCTCAGCCAG GACATCCGGC CCTCCCAGAC CTTCGGCGAG
CACTCCCGCA CCCGCCCCAC CCTGCCGATC AAGATGGTGA TCAGCGACGA TCGCCAGGCG
CTGATCCCGA TCCGCGATCC GGAGGAGGCG CTGACCACGG CGTACGTGAT CCATCCCTCG
TCGCTGCTGG ACGCCCTGAT CGCGTTGTTC GAGGCCGAGT GGCGGCTGGC GCTGCCGCTC
CCGGAGGTCT CCGAGCAGGG ACCGGACGAG GCGACCCGCA CGCTGCTGTT GCTGCTGGCC
TCAGGCCAGA CCGACGAGGC GATCGCCCGC GCGCTGGGCT GGAGTTTCCG CACCACGCAG
CGGCGTGTCC AGGCCCTGAT GCGGACGCTG GACGCCACGA CGCGGTTCCA GGCGGGAATG
GAGGCGCGGG GGCGGGGCTG GGTGTGA
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| Protein sequence | MLRPANKGTD VLESVGLPEP CGTVYSALVE HPESGAARLA EITRLPLSKV RGALDRLTAE
GMASRAPGRT AVWFASAPDV AIGSLVGRAE QELVRVRSLM NGLMDSYREA ARYTDPSLSV
EVVRGYEEVG RRFSHLQSEA RHQIRGFDRP PYLNNPGTNH DNAARRARSG LNYRVIYSRA
ALAWPDRLSQ DIRPSQTFGE HSRTRPTLPI KMVISDDRQA LIPIRDPEEA LTTAYVIHPS
SLLDALIALF EAEWRLALPL PEVSEQGPDE ATRTLLLLLA SGQTDEAIAR ALGWSFRTTQ
RRVQALMRTL DATTRFQAGM EARGRGWV
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