Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4562 |
Symbol | |
ID | 8335916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5190009 |
End bp | 5190470 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644957663 |
Product | Cupin 2 conserved barrel domain protein |
Protein accession | YP_003115265 |
Protein GI | 256393701 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0662] Mannose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGG CCTACGTCTC ACAGCCCGAT CAGCAGCAGA AGCTCGAATG GCTCGACGGG GGGACGCTCG CGATGCTCCT GGACGGGGCG GCCACCGATG GGAACCTGAT GATCGGCCGC TTCGACGTCG CCGAGGGCGA GGCGCCGCCC TACCACGTGC ACACCCGCGA GGACGAGGTC TTCCTGCTGA TCAAGGGGAC CGCGCTGGTG TGGTGCGACG ACCAGGAGTA CGAGCTGTCC GAGGGCGGCG TGGTCTACCT GCCGCGCCGG CATCCGCACG GCTACCGCAT CACCTCCAAG CGTGCCGACC TGCTGATGAT CAACACGCCG GCCGGCATCG AGGGCATGTT CCGCGCCGTC GGCCGCGACC TGAGCACGCC GCGCCCCGAG GGCTTCGAGA TCAAGCCGGA CCCGGCGGTC TCCGAGCAGT ACGGCAGCGC GATCGTCGGA CCGCCGCGCT AA
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Protein sequence | MSMAYVSQPD QQQKLEWLDG GTLAMLLDGA ATDGNLMIGR FDVAEGEAPP YHVHTREDEV FLLIKGTALV WCDDQEYELS EGGVVYLPRR HPHGYRITSK RADLLMINTP AGIEGMFRAV GRDLSTPRPE GFEIKPDPAV SEQYGSAIVG PPR
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