| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4556 |
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| Symbol | |
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| ID | 8335910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5184830 |
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| End bp | 5185792 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644957657 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003115259 |
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| Protein GI | 256393695 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.741215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACCATCC TCACCGAGGC GGCGGCGGGC TCCGGCCCGT CGTCGCCGCC GCTGCCCGTC
CCCCGCAGCC GCGGCGCGCT GTGGCGGCGC CTGCGCAAGG ACAAGGCCGC CGCTACCGGC
ATGGCCATCA TCGCGGTGAT GGTGCTGGTC GCGCTCTTCG CGCCGCTGCT GACCGCCCTG
GAGGGCCAGA ACACCACCTC CCTGCACCCG GAGCTGGTCG ACTCCGCCAG CGGCGGCACT
CCCCTGGGCT CGCTCGGCGG GATCAGCGCG AGCCACTGGT TCGGCGTGGA GCCGCAGACC
GGCCGCGATC TGTTCGCGCG GCTCGTCTAC GGCGCCCGGA TCTCCCTGGG CGTCGCGCTC
GGCGCCACCG TGCTGCAGGT GCTGATCGGG GTCTCGGTCG GCATCGCCGC CGGACTCGGC
GGGCGGGCCA CCGACGCCGT GCTGTCGCGG CTGACCGACC TGACGCTGGC GTTCCCGTCG
GTGCTGTTCG CGATCGGGCT GATGGCGATC GTCCCGGGCT CGGTGCCGCG GCCGCTGATC
CTCGCCGTGG TCATCGCCGT GCTCGGCTGG GGCAGTACCG CACGGCTCGC GCGCGGGCAG
GCGCTGTCGC TGCGCACCCG CGATTACGTG GCCGCCGCCA AGCTCTCCGG CGCGCCGCCG
CTGCGCGTGG CCCGGCGGGA GATCCTGCCC GGGCTGGTGA CGCCGATCCT GACCTACGCC
GCGCTGCTGG TGCCGACGAA CATGATCTCC GAGGCCGGGC TGTCGTTCCT GGGCGTCGGG
GTGCGGCCGC CGACGCCGTC CTGGGGACAG ATGCTCTCGG CCGGCACGAC GTGGTTCCGG
CCGGACGTGA TGTACGTGCT CGTCCCCGGC GGCGCGCTGT TCCTGACCCT GCTGGCGTTC
ACGCTGCTGG CCGACGGGGT CCGCCGGACC CTGGACCCGC GCAACACGGA GGTCGCGCCG
TGA
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| Protein sequence | MTILTEAAAG SGPSSPPLPV PRSRGALWRR LRKDKAAATG MAIIAVMVLV ALFAPLLTAL
EGQNTTSLHP ELVDSASGGT PLGSLGGISA SHWFGVEPQT GRDLFARLVY GARISLGVAL
GATVLQVLIG VSVGIAAGLG GRATDAVLSR LTDLTLAFPS VLFAIGLMAI VPGSVPRPLI
LAVVIAVLGW GSTARLARGQ ALSLRTRDYV AAAKLSGAPP LRVARREILP GLVTPILTYA
ALLVPTNMIS EAGLSFLGVG VRPPTPSWGQ MLSAGTTWFR PDVMYVLVPG GALFLTLLAF
TLLADGVRRT LDPRNTEVAP
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