| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4532 |
|---|
| Symbol | |
|---|
| ID | 8335886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5162218 |
|---|
| End bp | 5162562 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644957634 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_003115236 |
|---|
| Protein GI | 256393672 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.339774 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.601341 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCA CCTGCACCGC ACGACAGGCC GAGCAGCAGA TCGTCGTCAC TGTCACCGGC
GAGATCGATC TGGCGGTCTA CCCGCGCCTG CGAGCTGAGG CCGAGATCTG GGCCGGCAAG
GACGCCGATG TGATCCTGGA CTGCCGACAG GTCACCTTCA TGGATTCCAT GGGCGTCCGC
TTCCTGGTCC AAGTCCGGCA GATGCTCAAC GACACCGGCC ACACCATCTC CCTGGCCAAC
CCCTCCAAAC CGGTCATGCG CGTCCTGGAG CTGGCCGGCC TGCGGGACTT GTTCGCCTAC
ACCCATGACG AGCGCGAACC GGCCACGGAC GGCGCAGCCT CTTAG
|
|---|
| Protein sequence | MEFTCTARQA EQQIVVTVTG EIDLAVYPRL RAEAEIWAGK DADVILDCRQ VTFMDSMGVR
FLVQVRQMLN DTGHTISLAN PSKPVMRVLE LAGLRDLFAY THDEREPATD GAAS
|
|---|
| |