| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4519 |
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| Symbol | |
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| ID | 8335873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5146883 |
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| End bp | 5147875 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644957621 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003115223 |
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| Protein GI | 256393659 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.736409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.962109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGAT TCGCCCGGCG GCTGGCCGGC AAGCTCCTGG CCGGACTGGT GATGGTCTGG
GTCGTGGTGA CGTTCACGTT CTTCCTCGTG CACGCGCTGC CCGGCAAGCC CGGTGATGTG
CAGTACGAGC AATACATCAT GATGGGGATG AACTCCGAGC AGGCGTCGGC CAAGGTGCAG
GCGGTCTACG GCTTCACCTC CCACGCGCCG CTGCTCTCCC AGTACACCGG GTACCTCGGC
AAGCTCGCGC ACGGGGACCT GGGGCAGTCG ATCAGCTACT CCGGCGTCCC GGTCAGCCAC
CTGATCTGGT CCGCGCTGCC GTGGACCGTG ATCCCGGTGC TGTCCGGGCT GCTGGTCAGC
TTCCTGATCG GGGTGGTCGC CGGCATCTTC GCCGCGGTCA AGCGGTCCAG CCGCTGGGGC
GGTCTGCTGA CCGTCTCCGG CTCGCTGGTC GCCGGCGTCC CCGCCTTCGT CCTGGCCCTG
CTGCTCCTGG TGGTGTTCCA CACCGAGTGG AACCTGCTGC CCGACGCCGG CACCAGCGAC
ATCCAGTACA CCCCGGGCTG GAACCTGCCC TATATCGGGT CGGTGTTCCA GCACGCGGTC
CTGCCGGTGT GCACCTACGC GCTGCTCAGT TACGGCGGCT GGCTGCTGGC GATGAAGTCC
TCGGTGGTCT CCGTGCTCGG CGACGACTTC ATCCTGGCCT CCGAGCTGCG CGGCATCACC
CCGGTGACGC GGGCCCGCTA CATCGGCCGC AACGCCATCC TGCCGCTGTT CACAGTGCTG
GCGCTGTCCT TCGGGGTGAT GTTCGCCGGG TCCTTCTTCA TCGAGGACAC CTTCGACTAT
CCGGGGCTCG GCAACCTGCT GCTGAAAAGC ATCGGCACGC GCGACTACCC GGTGATGGCC
GGGGCGTTCC TGCTGATCAC CGTGTCCATC ATCATCGCGA ACATCCTCGC CGACCTCTGT
TACACCCTGA TCGACCCGAG AGTGAGGCGC TGA
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| Protein sequence | MTGFARRLAG KLLAGLVMVW VVVTFTFFLV HALPGKPGDV QYEQYIMMGM NSEQASAKVQ
AVYGFTSHAP LLSQYTGYLG KLAHGDLGQS ISYSGVPVSH LIWSALPWTV IPVLSGLLVS
FLIGVVAGIF AAVKRSSRWG GLLTVSGSLV AGVPAFVLAL LLLVVFHTEW NLLPDAGTSD
IQYTPGWNLP YIGSVFQHAV LPVCTYALLS YGGWLLAMKS SVVSVLGDDF ILASELRGIT
PVTRARYIGR NAILPLFTVL ALSFGVMFAG SFFIEDTFDY PGLGNLLLKS IGTRDYPVMA
GAFLLITVSI IIANILADLC YTLIDPRVRR
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