| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4492 |
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| Symbol | |
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| ID | 8335846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5119117 |
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| End bp | 5120181 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644957594 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003115196 |
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| Protein GI | 256393632 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0122435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCGA GAACACCTTC CTCGATCGGC CGGCTGCTCA CCGCGGCGCT GGCCACGCTG
CTCCTGATCG CCGGCTGCTC GTCATCGAGC TCGAAGCCGA AGACCGCCGC CGCCGGCGGC
GGTTCCTGCC CCTACACCTT CGCCGTCATC ACCCACGGCG ACAACGGCAA CTTCTGGAGC
GTCGTCTACA AGGGCGCCAA GGACGCCGCC AAGGACACCG GCTGCAAACT CTCCGAGACC
TACGGCTCCC AGCAGCAGGG CCAGGCCCAG CCCGACGACA ACGCCGAGAA CGCGCAGATC
CAGAACGCGA TCAACGCCAA GGTCAACGGC ATCATCGTCT CCGACCACGC GCCGAGCGTC
ATGAACTCCA CCCTCGCCGC CGCCTCCGCC GCGGGCATCC CGGTGGTGCT GGTCAACGCC
GGCTGCGACG ACACCGACAT CGCCGCGGCG AAAGCCATCA CCTGTGTCGG ACAGCCCGAG
CAACTCGCGG GCAAACAAGC CGGGCAGCGC TTCGCCAGCG AAAACGCCTC CAACGTCCTG
TGCGTCATCC ACCAGTCCGG GCAAAACCTG CTCGACCGCT GTGACGGCAT CGCGCAGGGT
CTGGGCGTCG GCCAGAAGTG CTCGACCGGC AGCGCACCGG CTGCCGGACC TGCTTGCACC
GAGCTGATCC TGTCCACGCC GAACGCCGCC TCCAACCCGC AGCAGGCCGT CGGCCAGGTC
ACCGCCTACC TGCAGTCGCA CCCCGGCGTC AACGCGGTGA TGACGCTGAA CAACGCGATC
GGGCAGTCGC TGGTCGTCGC CAAGCCGGCG AAGGTGAAGA TCGCCACCTT CGACCTGTCC
AGCGACGTGC AGAACGACCT GCAGGCCTCC CCGCCGACCC TGGACTTCGC CGTGGACCAG
CAGCAGTACC TGCAGGGCTA CCTACCGGTG GAATTCCTGT TCCTCTACAA CAAGCACGAG
GGCAACTCCG TCGGCGGCGG CACGACCGTG GCCAGCGGAC CCAAACTCGT CGACAGCACC
ACCATCAAGT CCGTGGCAGC CGCGATCGCC GCCGGGGACG ACTGA
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| Protein sequence | MAPRTPSSIG RLLTAALATL LLIAGCSSSS SKPKTAAAGG GSCPYTFAVI THGDNGNFWS
VVYKGAKDAA KDTGCKLSET YGSQQQGQAQ PDDNAENAQI QNAINAKVNG IIVSDHAPSV
MNSTLAAASA AGIPVVLVNA GCDDTDIAAA KAITCVGQPE QLAGKQAGQR FASENASNVL
CVIHQSGQNL LDRCDGIAQG LGVGQKCSTG SAPAAGPACT ELILSTPNAA SNPQQAVGQV
TAYLQSHPGV NAVMTLNNAI GQSLVVAKPA KVKIATFDLS SDVQNDLQAS PPTLDFAVDQ
QQYLQGYLPV EFLFLYNKHE GNSVGGGTTV ASGPKLVDST TIKSVAAAIA AGDD
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