Gene Caci_4467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4467 
Symbol 
ID8335821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5090629 
End bp5091234 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content73% 
IMG OID644957569 
ProductIsochorismatase 
Protein accessionYP_003115171 
Protein GI256393607 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1535] Isochorismate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.911951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.813691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCGT CCGGGATCGA GCCCATCGAG CCTTATCGGC TGCCCGCCGA GGGCGAGCTG 
CCCGTGCAGC GCGTCGCGTG GACGCCGGAG CCGGGCCGGG CGGTGCTGTT GATCCACGAC
ATGCGGGAGC ACTTCCTGCG GTTCTTCCCG GCCGGGCGCG ATCCGCTGGC GACGCTGGTG
GCGAACACCG TGCGGCTGCG CGAGGCGTGC GCGGCTGCCG GAATCCCCGT CGTCTTCGCG
GCGCAGCCCG GTGGCGAGGA GCTGGAGCCC GACCGGGCGA TCGTGCCCGA GCTGGCGCCG
CGGCCCGGCG ACAAGGTCCT GACGAAGCGG CGGCACAGCG CGTTCCACCG TACGCCGCCG
GCCGACGTGC TCTGGCAGAC CGGGCGCGAC CAGGTGATCG TCTGCGGGGT CTACGCGCAC
ATCGGGTGTC TGACCAGCTG CGTGGAGGCG TTCAGCCGGG ATGTGCAGGC GTTCCTGGTC
GCGGACGCGG TCGCGGACTT CAGTCCCGAG AAGCATCGCG CGGCGCTGAT GCTGGCGGCC
GAGGTGTGTG CCATGACGCC GACCACCGAT CAGCTGCTGC GGGCGCTGGC GGAGGCGGCG
CGGTGA
 
Protein sequence
MSASGIEPIE PYRLPAEGEL PVQRVAWTPE PGRAVLLIHD MREHFLRFFP AGRDPLATLV 
ANTVRLREAC AAAGIPVVFA AQPGGEELEP DRAIVPELAP RPGDKVLTKR RHSAFHRTPP
ADVLWQTGRD QVIVCGVYAH IGCLTSCVEA FSRDVQAFLV ADAVADFSPE KHRAALMLAA
EVCAMTPTTD QLLRALAEAA R