Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4467 |
Symbol | |
ID | 8335821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5090629 |
End bp | 5091234 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644957569 |
Product | Isochorismatase |
Protein accession | YP_003115171 |
Protein GI | 256393607 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1535] Isochorismate hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.911951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.813691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGCGT CCGGGATCGA GCCCATCGAG CCTTATCGGC TGCCCGCCGA GGGCGAGCTG CCCGTGCAGC GCGTCGCGTG GACGCCGGAG CCGGGCCGGG CGGTGCTGTT GATCCACGAC ATGCGGGAGC ACTTCCTGCG GTTCTTCCCG GCCGGGCGCG ATCCGCTGGC GACGCTGGTG GCGAACACCG TGCGGCTGCG CGAGGCGTGC GCGGCTGCCG GAATCCCCGT CGTCTTCGCG GCGCAGCCCG GTGGCGAGGA GCTGGAGCCC GACCGGGCGA TCGTGCCCGA GCTGGCGCCG CGGCCCGGCG ACAAGGTCCT GACGAAGCGG CGGCACAGCG CGTTCCACCG TACGCCGCCG GCCGACGTGC TCTGGCAGAC CGGGCGCGAC CAGGTGATCG TCTGCGGGGT CTACGCGCAC ATCGGGTGTC TGACCAGCTG CGTGGAGGCG TTCAGCCGGG ATGTGCAGGC GTTCCTGGTC GCGGACGCGG TCGCGGACTT CAGTCCCGAG AAGCATCGCG CGGCGCTGAT GCTGGCGGCC GAGGTGTGTG CCATGACGCC GACCACCGAT CAGCTGCTGC GGGCGCTGGC GGAGGCGGCG CGGTGA
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Protein sequence | MSASGIEPIE PYRLPAEGEL PVQRVAWTPE PGRAVLLIHD MREHFLRFFP AGRDPLATLV ANTVRLREAC AAAGIPVVFA AQPGGEELEP DRAIVPELAP RPGDKVLTKR RHSAFHRTPP ADVLWQTGRD QVIVCGVYAH IGCLTSCVEA FSRDVQAFLV ADAVADFSPE KHRAALMLAA EVCAMTPTTD QLLRALAEAA R
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