| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4465 |
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| Symbol | |
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| ID | 8335819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5086877 |
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| End bp | 5089951 |
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| Gene Length | 3075 bp |
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| Protein Length | 1024 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644957567 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003115169 |
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| Protein GI | 256393605 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.435845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATACGA TCCGGTTTCA GGTCCTCGGC CCGCTGCGGG GCTGCCGCGG CGAGGAGGAA
CTGGCCACGG GCAGCCCGCA GCAGCAGGCG ATGCTGGCCG CGCTGTTGCT GCTGCCGGGG
CGGACCGCGA GTTCGGCGGA GCTGATCGAC GCCCTGTGGG GCGACCAGCC GCCGAGCCGG
GCGCGCTCGA TCCTGCGCAC GTATGCCTGG CGCTGGCGGC GGGTCCTGGA TCCGGACGCC
GCGGACGGCG CCGCCTCGGA AGTGCTGGTC TCGCTGGCCG GCGGCTACCG GCTGGCTCTG
CCGCCCTTCG GCGGCGGTGG CGGCGGGGCA GGCTCCGCAC GAGGGCGCGC GAACGGAAAC
GCCGCGCCGG CCGGTGCTTC CGCCGCCGCT GTCAACGGCG TCAAAGATCC TGGCGCCTCC
CCCACCGGCG AGAAGCCCGG CGGGTCCAGC GGGTCCCGCG AGTCCGGTTG GATCGACTGG
TCCAGCGGCG ACAGCCTGCC GGTGGACGCC GAGCGCGCCG AGCACTGGGC CGCCGAGGCC
GACAAGGCAA GCGCTGCCGG ACAGCCGGAG CAGGCTCGGG AGCTGCTGCG GCGCGCCGTG
GACCTGTGGA CCGGGGTGCC GCTGGCGGGG GTCCCGGGAC CGTTCGCCGA ACGGCAGCGG
CGGCGCTTCG CCGAGCTGCG GCTGAGCCTG CTGGAGCGGC GGATCGCGCT GGACGTGGAG
CTGGGACGCG GCGCTTCGTG CGTGCCGGAG CTGCGGGCGC TCACCGACGA ACACCCGCTG
CGGGAACGGT TGTACGCGCT GCTGATGCGG GCGCTGTCCC AGTCCGGACG GCAGGCCGAC
GCGCTGGCGG CGTTCACCGC GGCGCGGCGG CTGCTGATCG GCGAACTCGG CGTCGAGCCG
GGCGCCGAGC TGCGCGCGAT GCACGCCGAG GTGCTGGCCG GCGGTCCGCC GAGCCCGCCG
GCCGGAGCCG CGGCGACGGC GGCCGCGGCG TCGCGGATGC GGCGCGTCCC GGGTCAGGGC
CCGCAGAATC CGGTCGTGCC GCGTCCGGCG CAGCTGCCGC CGACCGAACC GGACTTCGTC
GGGCGCGGCG CGCTGGCCGA ACGCCTCGGC GCCGAGCTGA GCGCGGGCGC CGCCGGCACC
ACGCCGACGG TGCTGGCGAT CGCCGGGATG GGCGGCGTCG GCAAGAGCAC GCTGGCGCTG
CACGTCGCAC ACCGCGCGCG CCCGGCCTTC CCCGACGGCC AGCTCTACGC CGATCTGCGC
GGCACCGGTG CCACGCCGGT CCCGCCGCAG GCCGTGCTGG AGGACTTCCT GCACGCCCTC
GGCGTGGCGA CCGAGCAGAT CCCGGAGGGT ACGGCCGCGC GCTCCTCGCT GTTCCGCACT
CTGCTCGACG GCCGCCGGCT GCTCGTCGTG CTCGACGACG CCGCCAACGC CGCGCAGGTC
AGACCCCTGC TCCCGGGCGC CGGCGGCTGC GCGGTGCTGG TCACCAGCCG GGCCCGGCTG
GTCGCGCTGC CGAAGTCGGC GCAGGTGTGG CTGGACGTGT TCGACGACGA GGAAGCCCTC
GGGCTGCTCG GGCGGGTCGC CGGCCCGGAG CGTCCGCACG CCGAGCCGGA GGCCGCGCGC
CTGCTGGTCG ACGCCTGCGG ACGGCTGCCG CTGGCGGTGC GGATCGTGGC CGCCCGGCTC
GCCGCGCGCC CGGCGTGGAC CGTCGCCTCG CTGGCCGGAC GGCTGGCGGA CGAGCGCTCG
CGGCTGCGGG AGCTGCGGAT CGGGGAGCTG GCGGTCGCGC CGGCCTTCGA GGTCGGCTAC
CAGCAGCTGA CCGCCGCGCA GGCACAGGCC TTCCGGCTGC TCGGCGCGGT CGAGGCGGCG
GAGATCGGGC TGCCCGCCGC GGCCGCGGTA CTAGAGCTCC CGGTGGCCGA CGCCGAGACG
GTGCTGGAGT CGCTGGTCGA CGTGGCGATG CTGGAATCGC CGGCCGAGCA CCGGTACCGG
CATCACAGCC TGCTGCGGGA CTTCGCGCAC GGCGCTGTCG GGGACGCCGA CCGCGCGGCG
GCCGAAGGGC TGGCGGCGCG CTCGCGGCTG GCCCGGTTCC TGCTCGCCGG GGCGTGTGCG
GCCTTCGAGA CGGCGGTCCC CGGCGACCCG ATCCGGGAGA CGCTGGCGCC GCAGGGCATC
GGCGACTTCG CGTTCGACTC CCCGGCCGCC GCCCGCGCCT GGGCGCGCGG CGAGGCCGCG
ACCGCCGCGG AGCTGACGGC TCGGATCGCC GCCGAGGCGC TGCGCGAGGG CCCGCGCGCC
GCGGAGTACC GGGAGCTGAT CCCGGCTTCC ATCAACCTGC TGATAGCGAT GAGTCCCTTC
GGTCCGGGAC CGTGGGGACG CCGGACCGCG GCGGCCGTGC AGGACCTGGC GCGCGCCGCG
GAGCGAGCCG GGGACGTGCG CGGGCAGGGC CGGGCGTGGT TCCTGGCGGG CAACACCGCG
CTGGCGGCGG GGCGGCTGGA CGAGGCCTCG CAGCACGGCC GGTGGGCGCT GGAGCTGTGC
ACCCTGGCCG AGGACCCGGT GATCGCCCGG CAGGTGCTGA ACGACCTGGG GGTGATCGCG
CACGGCCGCG GCGCGTACGA CGAGGCGGCG AGCCTGTTCG GCGAGGCGGT GGCGCTGGCG
CGGTCCCTGG GACACCGCAG CGGCGAGGCC AGTTCGCTGC TGAACATGGC GGTCTCCCGC
CTGCGCGCCG GACGCGCCGC CGAAGTCCTC GCCGACTGCG ACGGAATGCT GGCCTCGGCC
CACGAACGCG GCGACGCGGC TTCAGAGGCG CAGACCCGCT ATGTCAGCGG CCTGGCGCTG
GCCGCCCTGG AGCGGTCGGC CGAGGCGGCG GAGCGGTTCG AGACGGCAGC GATCGACTGG
ACCGCGCTGG GCGCCCTGGA CCGTGCGGCC CGCGCCCGAT TCCAGCTGGC GAAGGCACTG
CACAAGCTCG GCGCGGACGA ATCCGCCCGC GATCACGCCC ACGCCGCGCT GGCCGAGTTC
GAGTTCGACG GCCGCGTGGC GGATCAGCGA GCGGTGCGGG CGCTGCTCGA CGAGCTGGAC
GCGCCGCCGG GCTGA
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| Protein sequence | MNTIRFQVLG PLRGCRGEEE LATGSPQQQA MLAALLLLPG RTASSAELID ALWGDQPPSR
ARSILRTYAW RWRRVLDPDA ADGAASEVLV SLAGGYRLAL PPFGGGGGGA GSARGRANGN
AAPAGASAAA VNGVKDPGAS PTGEKPGGSS GSRESGWIDW SSGDSLPVDA ERAEHWAAEA
DKASAAGQPE QARELLRRAV DLWTGVPLAG VPGPFAERQR RRFAELRLSL LERRIALDVE
LGRGASCVPE LRALTDEHPL RERLYALLMR ALSQSGRQAD ALAAFTAARR LLIGELGVEP
GAELRAMHAE VLAGGPPSPP AGAAATAAAA SRMRRVPGQG PQNPVVPRPA QLPPTEPDFV
GRGALAERLG AELSAGAAGT TPTVLAIAGM GGVGKSTLAL HVAHRARPAF PDGQLYADLR
GTGATPVPPQ AVLEDFLHAL GVATEQIPEG TAARSSLFRT LLDGRRLLVV LDDAANAAQV
RPLLPGAGGC AVLVTSRARL VALPKSAQVW LDVFDDEEAL GLLGRVAGPE RPHAEPEAAR
LLVDACGRLP LAVRIVAARL AARPAWTVAS LAGRLADERS RLRELRIGEL AVAPAFEVGY
QQLTAAQAQA FRLLGAVEAA EIGLPAAAAV LELPVADAET VLESLVDVAM LESPAEHRYR
HHSLLRDFAH GAVGDADRAA AEGLAARSRL ARFLLAGACA AFETAVPGDP IRETLAPQGI
GDFAFDSPAA ARAWARGEAA TAAELTARIA AEALREGPRA AEYRELIPAS INLLIAMSPF
GPGPWGRRTA AAVQDLARAA ERAGDVRGQG RAWFLAGNTA LAAGRLDEAS QHGRWALELC
TLAEDPVIAR QVLNDLGVIA HGRGAYDEAA SLFGEAVALA RSLGHRSGEA SSLLNMAVSR
LRAGRAAEVL ADCDGMLASA HERGDAASEA QTRYVSGLAL AALERSAEAA ERFETAAIDW
TALGALDRAA RARFQLAKAL HKLGADESAR DHAHAALAEF EFDGRVADQR AVRALLDELD
APPG
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