Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4461 |
Symbol | |
ID | 8335815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5081104 |
End bp | 5081880 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644957563 |
Product | putative transcriptional regulator, MerR family |
Protein accession | YP_003115165 |
Protein GI | 256393601 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACACTGT CATATGACAG TGTCATCATC AGTCCCGTGA ACGGTGACTC GGCGGCATGG ACCATCGACC GGCTCGCGCG GCTGGCCGCG GCGGCGTTGG CGGCCGGGGC ACCGACCCAA CCCAACGGCC GGATCAGGGA GGTGCCCGAC GTGCGGACCA TCCGCTGGTA CACCTCCATC GGCCTGCTCG GCCGCCCGGC GGCGATGCGC GGCCGCACCG CGCTGTACGG CCGCTCGCAC CTGGCCCAGC TGGTCGCCAT CAAGCGGCTG CAGGCCGACG GACTGACCGT CGCGGCGGTG CAGGAGCGGC TGCTCGGCGC GGACGAGAGC GCGATCGAGG AGATCGCCCT GCTGCCCGCC GACCTGGAGG AGCTGATCAC TCGGGTCGAG GGGACGCAGG ACGCGGGCGA GCCTGAGCGC AAGCCCGAGC CGAAGGCGCA GACCCGGGCG CGGTTCTGGG TGGCGCCGGT GGCATCGACT CCTGCTGACG AGGAACCCGC AGCGAGCGCG CTCGCCGACC ACGACGCGCT CGCCAGATCC GCCGCACCCG CCTCACCTGC CGAACCCATC ACCGCTGCAC CTATCACCGC AGCACCCATT ACCACCGACG CCGTCTCCGA CATCGCAGTG CCCGTCCACG GCATTCGCCT GGCGCCCGAC GTCACCCTGC TCCTGCCGCC CGGCCGTGTG CCGGACGCCG CCGCCCGGGC CGCGATCGCC GAAGCGTCGC GGCCGCTGCT GGACCTGCTG GAGCGCCTCG GCCTGTCCGA GACCTGA
|
Protein sequence | MTLSYDSVII SPVNGDSAAW TIDRLARLAA AALAAGAPTQ PNGRIREVPD VRTIRWYTSI GLLGRPAAMR GRTALYGRSH LAQLVAIKRL QADGLTVAAV QERLLGADES AIEEIALLPA DLEELITRVE GTQDAGEPER KPEPKAQTRA RFWVAPVAST PADEEPAASA LADHDALARS AAPASPAEPI TAAPITAAPI TTDAVSDIAV PVHGIRLAPD VTLLLPPGRV PDAAARAAIA EASRPLLDLL ERLGLSET
|
| |