Gene Caci_4461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4461 
Symbol 
ID8335815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5081104 
End bp5081880 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content73% 
IMG OID644957563 
Productputative transcriptional regulator, MerR family 
Protein accessionYP_003115165 
Protein GI256393601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACACTGT CATATGACAG TGTCATCATC AGTCCCGTGA ACGGTGACTC GGCGGCATGG 
ACCATCGACC GGCTCGCGCG GCTGGCCGCG GCGGCGTTGG CGGCCGGGGC ACCGACCCAA
CCCAACGGCC GGATCAGGGA GGTGCCCGAC GTGCGGACCA TCCGCTGGTA CACCTCCATC
GGCCTGCTCG GCCGCCCGGC GGCGATGCGC GGCCGCACCG CGCTGTACGG CCGCTCGCAC
CTGGCCCAGC TGGTCGCCAT CAAGCGGCTG CAGGCCGACG GACTGACCGT CGCGGCGGTG
CAGGAGCGGC TGCTCGGCGC GGACGAGAGC GCGATCGAGG AGATCGCCCT GCTGCCCGCC
GACCTGGAGG AGCTGATCAC TCGGGTCGAG GGGACGCAGG ACGCGGGCGA GCCTGAGCGC
AAGCCCGAGC CGAAGGCGCA GACCCGGGCG CGGTTCTGGG TGGCGCCGGT GGCATCGACT
CCTGCTGACG AGGAACCCGC AGCGAGCGCG CTCGCCGACC ACGACGCGCT CGCCAGATCC
GCCGCACCCG CCTCACCTGC CGAACCCATC ACCGCTGCAC CTATCACCGC AGCACCCATT
ACCACCGACG CCGTCTCCGA CATCGCAGTG CCCGTCCACG GCATTCGCCT GGCGCCCGAC
GTCACCCTGC TCCTGCCGCC CGGCCGTGTG CCGGACGCCG CCGCCCGGGC CGCGATCGCC
GAAGCGTCGC GGCCGCTGCT GGACCTGCTG GAGCGCCTCG GCCTGTCCGA GACCTGA
 
Protein sequence
MTLSYDSVII SPVNGDSAAW TIDRLARLAA AALAAGAPTQ PNGRIREVPD VRTIRWYTSI 
GLLGRPAAMR GRTALYGRSH LAQLVAIKRL QADGLTVAAV QERLLGADES AIEEIALLPA
DLEELITRVE GTQDAGEPER KPEPKAQTRA RFWVAPVAST PADEEPAASA LADHDALARS
AAPASPAEPI TAAPITAAPI TTDAVSDIAV PVHGIRLAPD VTLLLPPGRV PDAAARAAIA
EASRPLLDLL ERLGLSET