| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4459 |
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| Symbol | |
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| ID | 8335813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5076245 |
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| End bp | 5077873 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644957561 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003115163 |
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| Protein GI | 256393599 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.084448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGC GTTCGAAGCG TGCGATGCCC GGGGAGGCCG ACTACGTCGT GGTCGGCGCC
GGGAGTGCGG GGTGTGTGCT GGCCGCACGG CTGGCCGGGA GCGGGGCGCG GGTGGTGCTG
ATCGAGGCCG GCGGCTCGGA CCGGACGACG CTGGTGCGCA AACCCGGGCT GATCGCCGCG
GTGCACAGCG TGCCGCAGCT GAAGGCGCGG CTGGACTGGG GCTACTACTC GGTGCCGCAG
AGCGACGCGC TGGAGCGCAA GATCCCGCAG ACGCGCGGCA AGGTGCTCGG CGGGTCCGGG
TCGGTGAACG GGATGCTGTT CGTGCGTGGG AACGCCGCGA ACTATGACTC CTGGGCCGCA
GAGGGCTGCG ACGGGTGGTC GTACGCGGAC GTGCTGCCCA GCTTCAAGAA GCTGGAGAGC
TGGGAGGAAG GCGAGACCGA GTTCCGCGGC GGCGCCGGAC CGATTAAGGT GCGGCGGCAG
ACGGACGTCA CGACCGCGAC GCTGGGCTTC ATGGAGGCGT TCGCCGACAC CGCCGGGGTG
AAGGTGCTCG ACGACTACAA CGGCGAGTCG CAGGAGGGCA TCGCGATCGT CCAGCAGAGC
GCGCACGACG GGCTGCGCTA CAGCTCCTCG GTCGGCTACC TGGACGACCA CGGCATGGCG
CAGCTCGACG TCGTCACCGG GGTGACGGTC GCGCGGGTGG TGCTGGAGAA GGGACGCGCG
GTCGGGGTCG AGGTCGTCGG CGAGGATGGT GTGCGGCAGG TGGTGCGGGC CACACGCGAG
GTGGTGCTGT GCGCCGGGGT GTTCGGCTCG GCGCAGCTGC TGCAACTGTC CGGGATCGGA
CCGGCGGAGC ATCTGCGCTC GGTGGGCGTC GAGGTGGTCC AGGACCTGCC GGTCGGGGAC
AACCTGCACG ACCACCTGTT CGTCCCGATG TGCTTCCTGA TGCCGGAGGC GCGGAACAAG
GGGACGGCGC CGTACTTCGC GCGCGGCTTC GTGAAGGAGA TGACGCGCGG CGGGACGTGG
GTCGGGCGGA CGGTGTTCGA GTCGGTGGGG TTCGTACGCA GCCCGAACGC CGGCAGCGTG
CCGGATTTGC AGATCCACGT GCTGCCGTGG TCCTATCCCG GACCGAACCA GGACGCGCCG
ATCCGGCACA AGGCCGACCC GCGGCGGACG CTGACGGTGA TGCCGACGCT GATCTACCCC
CACAGCCGCG GGACCCTGCG CCTGGCATCG GCCGACCCGC TCGCCGCGCC GCTCATCGAC
CCGGCGTACC TGCGCGAACC GGCGGACACC CAGCTGCTGC TGGACGGGAT GGAGATGGTC
CGCGAGGCGA TGGCGCACCG CTCACTGTCC GGGCGCGTGC AGGGCGAGAG CTCGCCGGGC
ACGGCGTACG CGAACCGCGC GGCGCTCGCC GCCGAGCTGC CGAACCGCGC GACGACGGTC
TACCATCCGG TGGGCACGTG CCGCATGGGC GTCGACGAGC GCGCGGTGGT GGACCCGGCC
CTGCGGGTGC GGGGGGTCGA AGGGCTGCGG GTCGCGGACG CCTCGATCAT GCCGAGCATC
GTCGGCGGGA ACACGAACGC CGCGGCGCTG ATGATCGGCG AGCATGCGGC GGGGCTGATT
CTGGGGTGA
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| Protein sequence | MGQRSKRAMP GEADYVVVGA GSAGCVLAAR LAGSGARVVL IEAGGSDRTT LVRKPGLIAA
VHSVPQLKAR LDWGYYSVPQ SDALERKIPQ TRGKVLGGSG SVNGMLFVRG NAANYDSWAA
EGCDGWSYAD VLPSFKKLES WEEGETEFRG GAGPIKVRRQ TDVTTATLGF MEAFADTAGV
KVLDDYNGES QEGIAIVQQS AHDGLRYSSS VGYLDDHGMA QLDVVTGVTV ARVVLEKGRA
VGVEVVGEDG VRQVVRATRE VVLCAGVFGS AQLLQLSGIG PAEHLRSVGV EVVQDLPVGD
NLHDHLFVPM CFLMPEARNK GTAPYFARGF VKEMTRGGTW VGRTVFESVG FVRSPNAGSV
PDLQIHVLPW SYPGPNQDAP IRHKADPRRT LTVMPTLIYP HSRGTLRLAS ADPLAAPLID
PAYLREPADT QLLLDGMEMV REAMAHRSLS GRVQGESSPG TAYANRAALA AELPNRATTV
YHPVGTCRMG VDERAVVDPA LRVRGVEGLR VADASIMPSI VGGNTNAAAL MIGEHAAGLI
LG
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