Gene Caci_4402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4402 
Symbol 
ID8335756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4997227 
End bp4997778 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content73% 
IMG OID644957505 
Productprotein of unknown function DUF1470 
Protein accessionYP_003115107 
Protein GI256393543 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCC TCGCCTACGC CGACCGGGCC GTGGCCCTGG TGAACACGGA CGACCACGGG 
ACCGGCCGAG ACCGCCTGCA GTCGAGCGAT GACGTCTACC GCCTCCTGCC GCAGGGCTGG
CGCGTGACCC CCACCGCCGC CTCGGCGGGC CTGGACGAAC TGCGCGAGGC CCGTCCCCGG
CTGCGGCGGG TCTTCGAGCT GGCCGCCACC GGGCGGGTCG AGCGCGCCAC CGAGGCGCTG
AACAAGCTGC TGTGCGACTT CCCGGTCTCG GCGTCGATCA GCGACCACGC CGACGGCGAC
TGGCATCTGC ACCTCACCGA CGAGCCCCAC GGGCTGGCTC GCTCGTACGT GACCGGGGCG
GCGTTCGGCT TGGCATACAC CATCGCCGAG CGCGGCCCGG ACCGGCTGGG GTTGTGTGAG
GCGCTGCCGT GCCGCGCGGT GTTCGTGGAC ACCACGACGA ACAGCTCACG GCGGTACTGC
TCGGACCGGT GCGCGACGCG GGCGAACGTC GCCGCCTACC GGGCTCGGAA GCGGGCCGAC
GTCTTGACCT GA
 
Protein sequence
MKLLAYADRA VALVNTDDHG TGRDRLQSSD DVYRLLPQGW RVTPTAASAG LDELREARPR 
LRRVFELAAT GRVERATEAL NKLLCDFPVS ASISDHADGD WHLHLTDEPH GLARSYVTGA
AFGLAYTIAE RGPDRLGLCE ALPCRAVFVD TTTNSSRRYC SDRCATRANV AAYRARKRAD
VLT