Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4359 |
Symbol | |
ID | 8335713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4947525 |
End bp | 4948142 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644957462 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003115064 |
Protein GI | 256393500 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.23587 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCGAAC AGCGCCACCA CGGCAACCGG CACGGACGCA GCGAGGACGC GCGGCGGGCC GTGCTCCAGG CAGCGGACGA TCTGCTCGTG GAGAAGGGGT TCGCGGGCGT CACGATCGAG GGCGTCGCGT CGGCTGCCGG CGTCGCCAAG CAGACGATCT ACCGCTGGTG GGGTTCGAAG ACGGACATCC TGCTGGACAC GTTCCTGGAG GACGCCGCGC GGGATCTGGC TCCGCAGGAG CACGAGACGT TGGCGGAGGA TCTGCGCGCG CATCTGCGGC GGCTGGCGGA CTTCCTGACC ACCAACGACG CCGGTGCGGT CTTCAAGGCC CTGATCGGCC ACGCCCAGCA TGACGCCGCC TTCGGCGAGA GGCTGCGCAC GCAGTACCTC GAGGAGCAGC GGCAGCGCGA CCGCGCGCCG CTGGACCGGG CGATCGAGCG GGGCGAGCTG CCCGCGGACG TGGACGTGCC GGCGGCGGTG GACCTGCTCG TCGGGCCGAT CTACCACCGG GTCCTGATGA CCGGTGATCC GGTGGACGAC CGGTTCATCG ACATGCTGGT CGAGCACTTC TTGCTGAGTT ACGAGCTCGG GCACTCCGAG CCGCGCGGGA GTTCGTAG
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Protein sequence | MAEQRHHGNR HGRSEDARRA VLQAADDLLV EKGFAGVTIE GVASAAGVAK QTIYRWWGSK TDILLDTFLE DAARDLAPQE HETLAEDLRA HLRRLADFLT TNDAGAVFKA LIGHAQHDAA FGERLRTQYL EEQRQRDRAP LDRAIERGEL PADVDVPAAV DLLVGPIYHR VLMTGDPVDD RFIDMLVEHF LLSYELGHSE PRGSS
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