Gene Caci_4359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4359 
Symbol 
ID8335713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4947525 
End bp4948142 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content70% 
IMG OID644957462 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003115064 
Protein GI256393500 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.23587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGAAC AGCGCCACCA CGGCAACCGG CACGGACGCA GCGAGGACGC GCGGCGGGCC 
GTGCTCCAGG CAGCGGACGA TCTGCTCGTG GAGAAGGGGT TCGCGGGCGT CACGATCGAG
GGCGTCGCGT CGGCTGCCGG CGTCGCCAAG CAGACGATCT ACCGCTGGTG GGGTTCGAAG
ACGGACATCC TGCTGGACAC GTTCCTGGAG GACGCCGCGC GGGATCTGGC TCCGCAGGAG
CACGAGACGT TGGCGGAGGA TCTGCGCGCG CATCTGCGGC GGCTGGCGGA CTTCCTGACC
ACCAACGACG CCGGTGCGGT CTTCAAGGCC CTGATCGGCC ACGCCCAGCA TGACGCCGCC
TTCGGCGAGA GGCTGCGCAC GCAGTACCTC GAGGAGCAGC GGCAGCGCGA CCGCGCGCCG
CTGGACCGGG CGATCGAGCG GGGCGAGCTG CCCGCGGACG TGGACGTGCC GGCGGCGGTG
GACCTGCTCG TCGGGCCGAT CTACCACCGG GTCCTGATGA CCGGTGATCC GGTGGACGAC
CGGTTCATCG ACATGCTGGT CGAGCACTTC TTGCTGAGTT ACGAGCTCGG GCACTCCGAG
CCGCGCGGGA GTTCGTAG
 
Protein sequence
MAEQRHHGNR HGRSEDARRA VLQAADDLLV EKGFAGVTIE GVASAAGVAK QTIYRWWGSK 
TDILLDTFLE DAARDLAPQE HETLAEDLRA HLRRLADFLT TNDAGAVFKA LIGHAQHDAA
FGERLRTQYL EEQRQRDRAP LDRAIERGEL PADVDVPAAV DLLVGPIYHR VLMTGDPVDD
RFIDMLVEHF LLSYELGHSE PRGSS