Gene Caci_4275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4275 
Symbol 
ID8335629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4850184 
End bp4850849 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content73% 
IMG OID644957378 
Producthypothetical protein 
Protein accessionYP_003114980 
Protein GI256393416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.411558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.289102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCT TCGCCACCCC CGAGCCGGTT CTCGTCGTGC TGGACATCCC GGCGGGCCGG 
GTGCGGCTGG TCGCCGGTGA GCGTGCCGAG TCCACGGTCG AGGTGCTGCC GGCTGAGTCC
TCGAAGAAGC GGGATGTGAA GGCCGCCGAG CAGACCGCGG TCGAGTACAG CGACGGGATA
CTGCGCATCA CGACCGCTGA GGCGAGCCGG TTCCTCGGCT CCGGTTCGGT GGACGTGACG
GTGCAGGTGC CCGCCGGCTC GCGGGTCGAG GGCAAGGCCG CCGCGGCCGA GCTGTACGGC
ACCGGACCGC TCGGCGAGGT CGTCTTCGAC GGCGCCTACC GCCTCGTGGA CCTCGCCGAG
GTCGCCGGCG CGCGGCTGAC CGTGCACAGC GGCTCGGTCG CCATCGGGCG CCTGACCGGC
TCGGCGCAGA TCAGCAACGG CACCGGCGAC ATCACGATCG CCGAGGCGGT CGCCGGCGTC
GTCGAGCTGC GCACCGAGGC GGGAAACGTG ACCGTGCACG CCGCCCGCGG CGTCTCGGCC
ACCCTGGACG CCGGTACCTC CCGCGGGCGG ATCACCAACG CACTGAAGAA CGGCGACGGC
GCCGATGCCG CCCTGACCAT CAAGGCGACC GCCTCCGCCG GCGACATCAC GGCCACCAGC
CTGTGA
 
Protein sequence
MNTFATPEPV LVVLDIPAGR VRLVAGERAE STVEVLPAES SKKRDVKAAE QTAVEYSDGI 
LRITTAEASR FLGSGSVDVT VQVPAGSRVE GKAAAAELYG TGPLGEVVFD GAYRLVDLAE
VAGARLTVHS GSVAIGRLTG SAQISNGTGD ITIAEAVAGV VELRTEAGNV TVHAARGVSA
TLDAGTSRGR ITNALKNGDG ADAALTIKAT ASAGDITATS L