Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4262 |
Symbol | |
ID | 8335616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4838486 |
End bp | 4838920 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644957365 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003114967 |
Protein GI | 256393403 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.388354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.116604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTACTA TCGCACCTCC CCGGCTGGTC GACCGGTACC GCGCCGGGCA AGAGTCCGGC GAGCGCGGGG ACCTGTTCGA CGCCGACTGC CCGACCCGCC TGCTGCTGGA CCGGATCGGC GACAAGTGGA CCGTCCTGGT CGTCCTGCTC CTGTCCGACG GCCCGATGCG CTTCACCGAA CTGCGCACCC GCCTGGGCCG CGTCGCCCCG AAGGTGCTGA CCCAGTCGCT GCGGCGCATG GAGCGCGACG GCCTGGTCAC CCGCCAGGTC TTCGCCGAGG TCCCGCCGCG CGTGGAGTAC ACGCTCACCG AGCTGGGGCA CTCCCTGGCC GAGCCGATCG CGGTGATCGG CGACTGGGCC GAGGTCAACA TGCCCCGGCT CACCGCGGCG CAGCAGGCGT ACGACGCCGC GCACGCGACC GACGGCGACC GCTGA
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Protein sequence | MVTIAPPRLV DRYRAGQESG ERGDLFDADC PTRLLLDRIG DKWTVLVVLL LSDGPMRFTE LRTRLGRVAP KVLTQSLRRM ERDGLVTRQV FAEVPPRVEY TLTELGHSLA EPIAVIGDWA EVNMPRLTAA QQAYDAAHAT DGDR
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