Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4246 |
Symbol | |
ID | 8335600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4818688 |
End bp | 4819086 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644957349 |
Product | Transthyretin |
Protein accession | YP_003114951 |
Protein GI | 256393387 |
COG category | [R] General function prediction only |
COG ID | [COG2351] Transthyretin-like protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0608669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGTTGT CCATCCTCGT CATCGACGTC GCCTTCGGCG TGCCCGGAGC CGAGCTCTCA GCCCGGCTCC GGCGCCGCAG CGAGGCCGGG TGGCAAGAGC TGTCCACAGG CCGCACCGGC GGCGACGGCC GCCTGGAGCT GCATCCCGCC CCCGCCGGCC GCGGCACCTA CCAGCTGGTG TTCGACCTCG ACGGCTACTA CCACGGCCTG GGCAGCGTCC CGCTGCACCC GCGCGCCATC GTCGAGTTCA GAGTCACCGA CGCCCACAAG GATCTGCAGC TGGCGCTGTT CATCTCGCCG CATTCCTTCT GCACGTTCCA GGATTCCGGC GCGATGCCGC CGCGCATTCC CGACTTCGCG ACCGACGCCG GGCCCGCCTC CGCTGAGCGG GCGGGCTGA
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Protein sequence | MKLSILVIDV AFGVPGAELS ARLRRRSEAG WQELSTGRTG GDGRLELHPA PAGRGTYQLV FDLDGYYHGL GSVPLHPRAI VEFRVTDAHK DLQLALFISP HSFCTFQDSG AMPPRIPDFA TDAGPASAER AG
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