Gene Caci_4206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4206 
Symbol 
ID8335560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4766487 
End bp4768082 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content71% 
IMG OID644957309 
Productnitroreductase 
Protein accessionYP_003114911 
Protein GI256393347 
COG category 
COG ID 
TIGRFAM ID[TIGR03605] SagB-type dehydrogenase domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACCG CCCACGACTA TCTGCGCACG GTGATGAACC GGGCCCGGGT GCCGATGGAG 
CCGATCGGCT TGGAACCGGA CTGGGGCGAC AAGCCCCGGC ATCTGAAGTA CTACCCGGAC
GCCGAACGGC TGCCGCTGCC GATGGAATCG GTGCCGACGC CCGATCCGGC TGGCGACCAG
TCCGGCAACC AGCGCGGCGA CCAGCCCGGC GGCTTCTCGG TCCCGCTGCT GGCGGACATG
CTCCGTCACT CCTACGGCTA CCTCGGGCGC CGTCTGGCTC CGCACGCCAA CAACGACCTG
GTCACGCTGC CGGACTACGC CGACGCCAAC TGGTGGCGCG GTACCGCTTC CGGCGGCGGC
TTGTATCCGG TGAGCGTTTA TTGGGCTTCC GGCGCGCGCG GCCCGGTGCT GCCCGGGCTC
TACCACTACT CGCCGCCGCA TCACGAGATG CGCCGGCTGC TCACCGGCGA TGTGACGGCT
GAGATCCGTG CCGCGTTGGG AGACGCACCG CAGTCCGTGC CCACCGACAC CGACCAGTTC
CTGGTGCTCG GTCTGAAGTT CTGGCAGAAC GCCTTCAAGT ACCAGAACTT CTGCTACCAC
GCCGTCACGA TGGACGTCGG GACGATTCTG CAGAGCTGGC AGATGTTCCT GGCGGACCAT
GGTCTGCACC TGACCCCGGC GTTCTGGTTC GACGACCGGC GCCTCGGGGA CCTGCTCGGG
GTACCGCCGG AGCAGGAGGG CGTCTTCGCG GTCGTGCCGC TGCCCTGGAC CGGGCCAGTG
GTAAAGACAG GCGAGAATCC CGAGTACCCG CCTCGAGTCC GTCTCAGCGA GCAGGAGCGG
TCACGCCGCG TGCGCACCTT CGACCTGAAC ATCGCGGTCC ATCAGGCCAC GATGACGCCC
GCGCCCCGGC CCGAACCGCC GGCGCTGGAT CCGGCTGCCG CGCACCGGCC GCCGGAGGAC
CGTCCGGTCG TGGACCTGCC CGAACCCCTG CCGCCGGCGC CGGCCCGGCA GGCGTTCCGG
GCACGCCGCA GCAGTTTCGG CCGGTTCAGC GGCGCGGTCC CGACCACCGG CGCCGAGCTG
GCCGCGATCC TGGCGGCCGC CTCGCAAGCC GCCGCGTTCG CGTGCGACGT CGCCGAACCG
GAGCGCGGGC TGGAGCTGGC CAAGTTCTAC GTCTTCGTCA ACCACGTCCG TGGTGTCGCG
CCGGCTGCCT ATGAGTACGA CCCCGCCGCG AACCGCCTGC TGCGCGTGAC GGACAGATCG
CCTGCGGACT TCCTGCAGCC GACGTACTTC CTGGAGAACT ACAACCTCGA AGAGGCCGGT
GCGGTGATCG TGCCGTCCGT GCGCGCCGAC GCGCTGTACG ACAGCGTCGG CGACCGCGGG
TACCGCCTCG TGAACGCCGT GGTCGGCGCG ATCGCGCAGG CGGTCTACCT GGCCTCGGCC
GGGCTCGGGC TCGGCTGCGG CGCGGCGCTG GGCTTCGACA ACCCCGCCTA CGTCGAGGAG
CTAGGGCTCG AGGGCACCGA CGAGGCGCCG CTGCTGATCC TCATGGTCGG CCGGGAGCGC
GAGCGGCCTG CCGACTTCCG CTACGAGATC GGCTGA
 
Protein sequence
MGTAHDYLRT VMNRARVPME PIGLEPDWGD KPRHLKYYPD AERLPLPMES VPTPDPAGDQ 
SGNQRGDQPG GFSVPLLADM LRHSYGYLGR RLAPHANNDL VTLPDYADAN WWRGTASGGG
LYPVSVYWAS GARGPVLPGL YHYSPPHHEM RRLLTGDVTA EIRAALGDAP QSVPTDTDQF
LVLGLKFWQN AFKYQNFCYH AVTMDVGTIL QSWQMFLADH GLHLTPAFWF DDRRLGDLLG
VPPEQEGVFA VVPLPWTGPV VKTGENPEYP PRVRLSEQER SRRVRTFDLN IAVHQATMTP
APRPEPPALD PAAAHRPPED RPVVDLPEPL PPAPARQAFR ARRSSFGRFS GAVPTTGAEL
AAILAAASQA AAFACDVAEP ERGLELAKFY VFVNHVRGVA PAAYEYDPAA NRLLRVTDRS
PADFLQPTYF LENYNLEEAG AVIVPSVRAD ALYDSVGDRG YRLVNAVVGA IAQAVYLASA
GLGLGCGAAL GFDNPAYVEE LGLEGTDEAP LLILMVGRER ERPADFRYEI G