Gene Caci_4204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4204 
Symbol 
ID8335558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4762543 
End bp4763664 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content70% 
IMG OID644957307 
Productputative lantibiotic biosynthesis protein 
Protein accessionYP_003114909 
Protein GI256393345 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.109106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC TCGCCGCCGA GCCGGCGACC GCCCCGGACG CGCCGTCCGA ACCCGGGCCG 
TGGCAGGCCG TCCACATCTT CTACGGCGCG GTCCGGCTGT CCATGCTCAC CGAGTCCATC
AGGCCTCTGA TCGCCGGACT GCGCCAGGAC GGCTTGCTCT CCAGCTGGTT CTTCATCAAC
TACTGGGTCG AGGGCACGCA TCTGCGGCTG CGCCTGCAGC CGTCGTCGGA AGCCGCGACC
GAGACGGTCC TGGAGCGTGC CGAAGCAGCG ATCGACGCGT ACCTGCGAAG GCGGCCCGCG
TTGTATTCGG CCGACCCGGA CTTCCTGTCC GACGTCTACA CCAAGATGTT CGACTTCGAG
TTCACCGACG AGCAGCGCGC GGTCTACCTC GACGAGAACG GCCGGATGCG GTTGCGGGAG
AACAACACCC ACAGCCGTGA GCCGTACGAG CCAGAGTACG GCAAGTACGG CGGCGCGGCC
GGGGTCGCGG TGGCCGAGTG GCATTTCGAG CACTCCTCGG ACCTGGTCGT GGACCTGCTG
CGGACGATGA ACACGCACCT GCGCTCCATC CGGCTGGGCA TCGCCGCACA GCTGATGATG
GTGACGGCGG CGGCGTTCGA AGCCGATGCC GCAACGTGCG CCGACTTCTT CGAGGGCTAC
CACGGCTTCT GGCGCCGTGC CTTCGACACC GACGGCGACG TGACCGACGA GGACTACGAC
AGCGCCTACG ACAAGACCGG TCCCGGGATC AGCCAGCGGT TCGCCGCGGT GCGCGAGGCG
TTCGCGCGCG GCGCCGCCGG GAGTCTGCCC GGCGTGCTGG GCGCCTGGGC CGAGCACTGC
ATCGAGGTGC GGGCACGGAT CGGCGCGCTG GCCGAGGCGG GCGCGCTGGT GTTCGAGTCC
TGGGACGGCT CCGACAACCA GGTGATCACC GACGCGGGCG CGGCGGCGCG GCGTCTGCTG
CTGCCGTACC TGCACATGAC GAACAACCGG CTCGGCATGA CGCTCACCGA CGAGGCGTTC
CTCGGCCGGA TCCTGGCCCG CGCGCTGCGC GAGGCGGAGC ACGCTGCCCC GGAGTCGGAG
TCGGAGTCGG AGTCGGAGTC AGAGCCGGAG GCCGCGTCAT GA
 
Protein sequence
MTTLAAEPAT APDAPSEPGP WQAVHIFYGA VRLSMLTESI RPLIAGLRQD GLLSSWFFIN 
YWVEGTHLRL RLQPSSEAAT ETVLERAEAA IDAYLRRRPA LYSADPDFLS DVYTKMFDFE
FTDEQRAVYL DENGRMRLRE NNTHSREPYE PEYGKYGGAA GVAVAEWHFE HSSDLVVDLL
RTMNTHLRSI RLGIAAQLMM VTAAAFEADA ATCADFFEGY HGFWRRAFDT DGDVTDEDYD
SAYDKTGPGI SQRFAAVREA FARGAAGSLP GVLGAWAEHC IEVRARIGAL AEAGALVFES
WDGSDNQVIT DAGAAARRLL LPYLHMTNNR LGMTLTDEAF LGRILARALR EAEHAAPESE
SESESESEPE AAS