Gene Caci_4190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4190 
Symbol 
ID8335544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4745130 
End bp4745573 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content73% 
IMG OID644957293 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003114895 
Protein GI256393331 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.724781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.244242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCG CTGCGAACGA GCCGGACGAC CTGCTCGACG CCGCCACCGT GATCCGCCAA 
GGCGCCCTCC GCCTGGCACG CCGCATCCGC GCCGCCCGCT CGGCCGGGGC GCTGAGCACC
AACAAGATCA GCGTGCTGAG TCACCTGGCG CGGATCGGCC CGTCCACACC GGGCGAGGTG
GCCGCCGCCG ACCACCAGCA ACCCCAGTCG CTGACCCGCG TATTCGCAGA CCTGGAGCGC
GACGGCTTGG TGCGCCGCTC CGCCGACACC GGCGACCGCC GCCAGTCGAT CATCTCGATC
ACCGACGCCG GCATCCAGGA ACTCCAGCGC GACGTCGCCG AGCGCGACGC GTGGCTCGCC
GGCGCCCTCG TCGCGTTGAC CGAGACCGAG CGCCAGGTGT TGCTCCTGGC CGCCGCGCTG
ATGGAGGGCA TCGCGGACAG CTGA
 
Protein sequence
MTTAANEPDD LLDAATVIRQ GALRLARRIR AARSAGALST NKISVLSHLA RIGPSTPGEV 
AAADHQQPQS LTRVFADLER DGLVRRSADT GDRRQSIISI TDAGIQELQR DVAERDAWLA
GALVALTETE RQVLLLAAAL MEGIADS