| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4187 |
|---|
| Symbol | |
|---|
| ID | 8335541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 4741881 |
|---|
| End bp | 4742978 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644957290 |
|---|
| Product | transcriptional regulator, ArsR family |
|---|
| Protein accession | YP_003114892 |
|---|
| Protein GI | 256393328 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0640] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.213842 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.285545 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCTTAC GCATCGACAT CACCGGCATG CCGCCCGAGC GGCTGCGGTT CGCCGTCTCT
CCGCTCGCCG AGCTGACCGC GATGCTGCAC GCGCTGGCCG GCACCGCGCA CCACCCGCGC
TTCGCGGCGT GGGCAGCCGG AGTGCGCGGG ACCTTGCGGC CTGAGCTGGC CGAGCGTCTG
CAGGAGGCCG AGTTCCTGTG GCGCTCCTCG CGTGCGGACT TCCTGCTGCC GGCACGGCCG
AAGGCGAGCC TGAAGGAGGA GTTGGACGAC GTCGACGCGA TCGGCGATGA GGCGTATGTC
CTCTCGGCGC TGGTCACCAC CTGCGGCAGC AACCGCGTCC ACTTCGGCGA CGCCTCGCCG
CTGACCGACG CGACCGCGCG CGAGCGTGCG CTGGACCTGG CTCAGGCGCG CGGCGCGGTC
CAGGAGGCCT TCGCCGAGCG GCTGCTGTCC GACCCCGGCG CGGTGCGGCG CAGGGTACGC
GAGACGCTGG AGCAGTGCGC CGAGGCCTTC TTCGACGCCG CCTGGCCCGA CGTGGCCGCG
CGCCTCGCGG CAGACGCACA GGTGAAGACG GATCTGCGCG AGCGCGACGG AATCGGGGCA
GCGCTTGCGG CGGTCTCGGC CGCAGTGACC TTCACCTCCC GCAAGGACGG CGACCAGAGC
ATCGTCGTGG ACAAGCTCCA AGACAACGCC ACCAGCGGAC AAACCGCCGG CGTGACCCTC
ATCCCCAGCG CCTTCGGCAG CCCACACCTC GTCGCCGTCC ACGCCCCCGG CTGGCGCCCC
GTGATGCAGT ACCCAATCGC CGAACCCGGC GCCCCAGACC ACGCAGTATC GATGGACGCC
ATCGAGCGCC GACTTCAGGC ACTGTCGCAC CCGGTGCGAC TGCGGTTGCT CAGGACACTC
GCCAGAAGCC CGCACACCAC TGGCGAATTG GCCGACGCCT GGCAGCTGAC CGCGCCCGAG
GTCTCCCGCC ACCTCGCAGT GATGCGCAAG GCCGGACTGT TGGTGACCGA GCGACGAGGC
CGGTACGTCT ACTACTCCCT CGACACCTCC GCCCTCACCG CGCTCGGCAC GGATCTGCTG
TCGGCGGTGC TGCGCTAG
|
|---|
| Protein sequence | MTLRIDITGM PPERLRFAVS PLAELTAMLH ALAGTAHHPR FAAWAAGVRG TLRPELAERL
QEAEFLWRSS RADFLLPARP KASLKEELDD VDAIGDEAYV LSALVTTCGS NRVHFGDASP
LTDATARERA LDLAQARGAV QEAFAERLLS DPGAVRRRVR ETLEQCAEAF FDAAWPDVAA
RLAADAQVKT DLRERDGIGA ALAAVSAAVT FTSRKDGDQS IVVDKLQDNA TSGQTAGVTL
IPSAFGSPHL VAVHAPGWRP VMQYPIAEPG APDHAVSMDA IERRLQALSH PVRLRLLRTL
ARSPHTTGEL ADAWQLTAPE VSRHLAVMRK AGLLVTERRG RYVYYSLDTS ALTALGTDLL
SAVLR
|
|---|
| |