| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4169 |
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| Symbol | |
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| ID | 8335523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4720623 |
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| End bp | 4724012 |
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| Gene Length | 3390 bp |
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| Protein Length | 1129 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957272 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003114874 |
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| Protein GI | 256393310 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0565327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0915983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCACGG GGTTGCCAGC GACGTTGGTG ACGACGGCTG CCGCGCTCGT GTTCGCGACG
CTGGGGTCCT TCGTCGCCGC ACTGGCGCAC TCCGAGCCGC CGGTGGTGGT GCGCGGTGCA
CCGGTCGCCG ACCGGGTGGT GCGGTATCTG GGGACGTACG GGCCCGACGG CGTGGGGGAG
CAGGACGCGG CGGTTGGCGC TGCTGCGCGG CGGTTCTTGG GGGACGTGCC GGGGGCGGTC
TACCGGATCG ACGCTTCGCC GACGCTCACG GTGAGCGGCG GTGGTACGGA GCCGTTCAGT
GACGCGGCAG TGGCGATTGC GAGCTCTGAT GTAGCCGCGC ACGCAACGCT GACTGCCGGG
CGTTGGCCGG TGGCTGCTGC TACCGGTGCC AATGCCAGTC TTAATTCCAG CCTTCCGGCT
AGAGGTACGA ACACGCCGAA TTTCCCTTCA GTACCCGTGG AAATCGGCCT CCCGGACTCA
CTGGTAGGCG CCGAGAATCT CCACCCCGGA TCTGCGCTCA CTCTCGCCGC AGGCCGACCC
GCCACCGTCG TCGGCGTCTA TCACCCCGAT GGCACCGCGT TCTGGCAGGC GCTTCCGCCT
CCCGCGCTGG CGCAGATCAC GGCCAACCCT GCGCAGGCGC TGGTCGTCGC CCCTGCCGCG
CTCGCTGGCG CCGACGGTCT CGGCCAGGCC GGCACTGCGA CGTGGATCGT CGATCCCCAG
CTAGACGGCG TGTCCGCGGA TCGGCTCTCC GCTCTCATCG ACCGTGCTGA CGTCGCGATC
GTGCACCAGG ATGCTCCCGC GCTACCTGGT GCCGCGCCGA TCAGCCCGGC GATCATCGTC
TCCTCGGCGT TGCCGGAACA GCGGGCGGTC GCGCGGCGCA CGACGGTCGC CGGGGAGGCT
GAGCTTGCTG TTCCAGCTGG TGTCCTGATC CTGCTCGCTG GGACTGCGAT GGTGCGTGCG
GCGCGGACCG TGGCTTCGCG GCGGCGTGCG GATCTTGTGC TGGCGCGGGG ACGTGGCGCT
GGTTCGGCGA AGCTGCTGGT CGCTGCTGGT TTGGAGGGTC TTGGTCTCGG GGTGCTGCTC
GTGGTCGCGG TTCCCTTTGC CGCGCCTGCT CTGGCGCGGC TGCTTGGCGT CGTTACAGAC
GTCAAAGCCC TTACTTTCCC TTCGACGGCA CTGCTTGCAG CTCTCATTAC GCTCGCCGCA
TCCGTTGCTC ACGCTGCTCT CGCCGTCGCT GCCGCGTGGC CCGATGCGGT TGAGCGTGCG
CCTGGTGCCG CCATTCGGCG TCGGAGTGCG CGCGTCGCAC GGTTCCAACG TGCCGGGACT
GACCTGGTTC TGGCCGGTCT CGCCGTCTGG GGTCTGATCC AGCTCCATCA CTACCGCTCG
CCGTTGGCTA GCCGAATCAG TGCTCAGACA GTGGCGGGCG GCAGTGCGGA CTCGCTGGAC
CCGGTCCTGA TCCTGGTTCC CGTCCTGGTC ACCGGCGCCC TGGCGGTCTT GGCGCTACGG
TTGTTCCCGC TGCTCGCTCG GCCGTTGGAT CGGCACGCCG GGCGACGGCG CGGGTTGACC
GGCGCGTTCG GCGTCTGGCA GGTCAGTCGG CGGACCAGTC GCCTGACCGG TGCGCTGTTG
CTCATGGTGA TGGCGATATC CGTTGGTGCT CTGGCTCTGA CTGCCACGGC GATGCGGACG
CGGAACGCCG GCGACCAGGC GGCGTTCGCG GTGGGGGCGG ACGTGAGGGT CGATGGCTCT
GCGCTGCCGC CCTTGGCGCG GCGTGCTGCG TATTCATCAG TGCCCGGAGT TACTGCTACG
ACGCCGCTGT GGTCCACCGC GGCGACCTCT GCCGACAGCT CCCACACCGC TGCGACGTTG
ATCGGGGTGG ATCCGCACAC CGCTGGGACC GTCTTGGCAT TCGGTCCAGG TACTGCCGAT
CCGGCGGCAC GCAGCGCGCT CGCTCACCTC GGCGGCACTC CGCTCAGCGG CATGACGTTG
CCCGGACGCC CCGTCCGGCT GACCATGGCG ACGAAGACCA CCATCTCCGA CGGTGCGCTG
CCAGCCGGAT CCGAGCTCGA ACTCACGCTC GTGGACGGCT CCGGGTTGGC CCTGACCCGA
TCTGCTCCGC TGACTACGAA CGACGCCGGA TTCGATGTGT CTGGCGCGGG TCCGCTGACC
TACCCGCTGC GTGTCACGGA CATCAAGGCC CTGACTCCGA TCTCGACGAC TACGCACCTG
GTCCACATCG ACGTCCTCGC CATCACCGGT ACCGACGCCG CTGGCGTGCC GACCGGTCCG
GCTACTTCGC CTGACGGGAG CAGTTGGCTG GTGACGGCGG CGCAATCTGG CCTGCCTGGC
AACAGCTCTG ACACCGTCGC CTGCTCGGTC CCGGTGGCGC AGCCTGGTTC TGAACAGGGG
TATGGCGGCG TGTTGTGCGA GACGAAGCCG TCGACGCAGG CCCTGTTCAC GCTCGCGTTC
CTGAGCCCGG GGATCGACGC CACCGGTCCG ACGGCGCCGC AGCGGCGTGA GCCGTTTGTC
GTGGACGCCG CTCTTCCGGT GCCGCTGGCC GACGGGATGG CTCGGGCGTT GCCTGCGGTC
GTCGACCAGG ATCTGCTCGA CGAGACGGGG ACGCATGTCG GCGACACGCT CACCGTCACC
GCTGACAACG CACCTGATAG CAGCAGCCTG ATTCCGGGCG GGTCCGACAC TCCGCCGCAG
CTCAGCCTGC ATATCACTGG GGTCGTCGTC GCCGTGCCGG GGCAGCGCGC GGGTCCGGCG
GCGATTCTGG ACCTGGCGAC GCTCGCCGAT CAGCTTCCGG GTCTCGGGCT CGATCCGCCG
ACCGATGCGA CGTGGCTGCT CAAGACGGCG CCGGGCGGTG ACGCAGAGGT CGAACATGCC
TTCGCCGCGC GTCCCGATCT CGGTACGCCG GTGTTGCGCA GTACGGCGGC GGCTGCTGTG
CGCGGTGACG TCTTTCGGTC CGGCTCATCA GGGCTCTTCA CTGCGTGCGT GTTTCTCGCT
CCTTTGTTCG CGCTGCTGGG GTTCGCGATG GACACGGTCA TCTCGATCCG CGAACGCTCT
CGTGGCTTCG CCGCGTTGCG GGCTTTCGGC GCGCGCCCTC GTGAACTGGC TTCGGCGCTG
CTGATCGAGC AGGGGGTCGT CGCCGTGTTG GCGCTGCTAG CGGGCACGGT CATCGGCGCG
GGGGTCGCGG CGATTACCGA ACCGTTGCTG GCGACGTCCT CCGACGGCTC GGCGGCCCAG
CCGGCCATGA CGGTCCTGAT TCCCTGGCTA CGTGCCGGCG GTCTGGGCCT GGCGACGGTC
GCCGCGGTCG TGGCGGTGCT GTCCGGCATC GCGCGCGCCG CCGCCGCGCT CGACCTGGCC
AGGGTGCTGC GTGCGGGGGA GGACGTATGA
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| Protein sequence | MRTGLPATLV TTAAALVFAT LGSFVAALAH SEPPVVVRGA PVADRVVRYL GTYGPDGVGE
QDAAVGAAAR RFLGDVPGAV YRIDASPTLT VSGGGTEPFS DAAVAIASSD VAAHATLTAG
RWPVAAATGA NASLNSSLPA RGTNTPNFPS VPVEIGLPDS LVGAENLHPG SALTLAAGRP
ATVVGVYHPD GTAFWQALPP PALAQITANP AQALVVAPAA LAGADGLGQA GTATWIVDPQ
LDGVSADRLS ALIDRADVAI VHQDAPALPG AAPISPAIIV SSALPEQRAV ARRTTVAGEA
ELAVPAGVLI LLAGTAMVRA ARTVASRRRA DLVLARGRGA GSAKLLVAAG LEGLGLGVLL
VVAVPFAAPA LARLLGVVTD VKALTFPSTA LLAALITLAA SVAHAALAVA AAWPDAVERA
PGAAIRRRSA RVARFQRAGT DLVLAGLAVW GLIQLHHYRS PLASRISAQT VAGGSADSLD
PVLILVPVLV TGALAVLALR LFPLLARPLD RHAGRRRGLT GAFGVWQVSR RTSRLTGALL
LMVMAISVGA LALTATAMRT RNAGDQAAFA VGADVRVDGS ALPPLARRAA YSSVPGVTAT
TPLWSTAATS ADSSHTAATL IGVDPHTAGT VLAFGPGTAD PAARSALAHL GGTPLSGMTL
PGRPVRLTMA TKTTISDGAL PAGSELELTL VDGSGLALTR SAPLTTNDAG FDVSGAGPLT
YPLRVTDIKA LTPISTTTHL VHIDVLAITG TDAAGVPTGP ATSPDGSSWL VTAAQSGLPG
NSSDTVACSV PVAQPGSEQG YGGVLCETKP STQALFTLAF LSPGIDATGP TAPQRREPFV
VDAALPVPLA DGMARALPAV VDQDLLDETG THVGDTLTVT ADNAPDSSSL IPGGSDTPPQ
LSLHITGVVV AVPGQRAGPA AILDLATLAD QLPGLGLDPP TDATWLLKTA PGGDAEVEHA
FAARPDLGTP VLRSTAAAAV RGDVFRSGSS GLFTACVFLA PLFALLGFAM DTVISIRERS
RGFAALRAFG ARPRELASAL LIEQGVVAVL ALLAGTVIGA GVAAITEPLL ATSSDGSAAQ
PAMTVLIPWL RAGGLGLATV AAVVAVLSGI ARAAAALDLA RVLRAGEDV
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