| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4167 |
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| Symbol | |
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| ID | 8335521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4716129 |
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| End bp | 4719623 |
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| Gene Length | 3495 bp |
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| Protein Length | 1164 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644957270 |
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| Product | Ig domain protein group 2 domain protein |
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| Protein accession | YP_003114872 |
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| Protein GI | 256393308 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.608426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0215824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGTTC GGAGAAGAAG GCGGCTCGCG GTGTCGGCCA CCGTGGTCGC GGCGCTGGTG
TGCGGCGCGC TGGCCGGTAC CGGAGGCGCG AGCGCGCAGA CCAGCGGTAC CGACGACACG
GCAGCACATA GCGGCGGCGG AGACGGTCGG CCCTGGCTGC CGCCGACGCC GGATCAGTGG
CCGTTGGTGG TCACCGCCTC GAACACCGCA CAGCAGGAGA TCACCCGCGG TATCGACTAC
CAGACCGACA CCTACCAGAC GGTCGGCGGT GTGCAGCACT CCACGGAGCT GAACGTCGAC
CTGTCCGACC CGAACGTCCG CCTGGGCGTC GTGGAGTCCC ACAATGAGAT CAACGACGCC
GCCGACGAGG TCCCCTCCTC GATGGCGAAC CGCACCGGCG CGGTCGCGGG CATCAACGGC
GACTTCTTCG ACATCTACGG CTCCGGCAGC CCGCACGGCA TGGTCGTCAT CGACGGCCGG
CTGGTGAAGA GCCCGAACCC GGCGTGGAAC CAGAACGTGG TCGTGCGCGC CGACGGCTCG
ATCGGCATGG GCGCCGAGGC GTATTCGGGC ACTGCGACGG ACGGCGCCGC GAGCCACCCG
ATCACCTCGG TCAACACTGT CGCGGACCTG TCCGCCAACG GCCTGGTGCG CATCACACCA
GACCTCGGCG ACAGCGGCAA GATCCCGGCG TCGGTCGTCG CCACCGGACA CCGCGACCCG
GCCGATGCCA GTGTCCTGAT CATCGACGCG GTGACGCCGA ACGTCACGGA CATCACCCAG
GTACCCGCCG GTACCGAAGA CCTGGTCGGC TCAGGAACCG CCGGCCAATG GCTGACAGCG
ACAGCGCACC CCGGCGACCG CGTGACGATC GCGGAGTCGA TCAGCCCTGA CAACGCCCCG
CGCCAGGCGC TGTCCGGCGG CGCCATCCTC GTGCAGAACG GCACGATGGC CGTGCCGGTG
CAGGGCAGCG GCGAGAACAA CGTCAACAAC CCGGTCACCG GTATGGGCGT GACCAAGGAC
GGCAAGCACG CGATCGTCGC AGTGTTCGAC GGCCACCAGC CGGAGGACGC CGCCGAGGGT
CTGACCCGGC CGCAGCTCGC CGGCTGGATG ATCGCGCACG GCGCCTACAA CGCCATGGTC
TTCGACTCCG GCGGCTCCAG CGAGATGGTC GCGCGCCAGC CGGGGCAGCA GCAGGTCAGC
GTCAGCAACA CGCCCTCGGA CGGCCACGAG CGCCCCGTCG CCAACGGACT CTTCTTCTAC
AGCACCGAAC CGCATCCCGC TCCCGCAGTC CGCGCCGTCG CGAATTCCGG CGCCCCGCTG
GCGGTTCTGA CGAACAGCAC CGTCCCGGTC GGGGCATATG CGGTAGACAC GCTCGGCAAT
CCCGCGAGCG ATCCGGTGAC GCTGTCAGTG CATCCGTCTT CAAGGGCGAG TATCAGTACC
GGAACAAACG GCGCGACCCT GACGGCGTCC GGCACGCCCG GCACCGGCGA ACTGGTCGCC
ACAGCTGGCC GCGCTCATTC CTCCGTGCCG CTGCGCGTGA CCGACCACCT CTCCTCGCTC
ACCCTCAGCC CAGCCACCGC CGACCTGAAC AACGGCGGAA CTCAGCAGCT CTCCGTCAGC
GCGACGACGC GGGACAAGCA GCCGGTCTCG CTGCTGCCCG CGTCGGTGGC TTGGACCGCC
TCCCCGCCGA ACCTGGGAAG CGTCGATCCC ACAACGGGAC TGTTCACCGC GGCGACCGAC
GACGAAGGCT TGGTGACCGT CACCGCCAGC GTGGACGGCG CGAGCGCGAC CACCTCCATC
GCGGTGGGTC AGCGCACTGA AATGGTCGAC ACGATGACCG ACGTGAACAA CTGGGCGGTG
AACACCCACG GCGGCGCGAC CGGCAGCCTC TCGCTGTCCA CGACAACCAA ACGGCTGCCC
ACCGACGCCG GCTCGATGGA CGTCAAGTAC GACATCCCGG CGGGCAGCGG CGTCAAGCAG
GTCGTGTTCT CCCCCACGGT GAGCGAGTCG TTCCCGCCGG CCGGGGAGAC GCAGCTACCC
GATGGCGTCG GGATCTGGAT CAAGGGATCG GGCACCGGCG GCTCCGGAAC TCCGCTGGGT
CTGGGCAACC TCACGCTCGC CGAGGCCTAC ACCGAGGTGA ACGGCCAATA CGTCGACTTC
TACCCGTCCA CGGTGACCTA CGACGGCTGG CAGCTCATCG TCGCCAACCT GCCTGCCGGA
TTGCAGTTCC CGATGAGCGT CAAGTTCCTG GACTTCCTGG TCATCAGCCC GACCCAGACC
CTGTCCGGTG ACCTGTATGT CAGTGACCTG CAAGCCCTGT ACTCGCCGCG ACCGCTCGTG
ACGCCGCCAT ACGTGGCGAT CCCGGACAAT CCGTCGTGGC TTCAGTTCAC CGAGGACCCG
GCGAAATTCC GTGCCGGCGG CACCACCTTG GCAGCACTCG ATGACGCCCA CACGCACGCC
GACGACCCGA ACTCCACCGG TAGCGTCGTA CTCAAGCAGG ACGGCACACA GATCAAGGCT
CTGCCATCAA GCCAGACCGG AGCGCTGTCG CTGCAGACCA TGGGCGACAT GAGCGACACC
GGCAGCACCG CCAACCTGAC GTATCTGAAA TCGCTGCTGG ACGGTACCGG CGTGCCGTAC
CACGAAGGCG TCGGCAACCA CGAGATCACC CAGGGTGCGG ACCCGGAGAA CAAGAACTGG
ACCAGCCTGT TCGGCGCGAC GCACTACAGC TACACCCAGG GTGCCGCGAA CATCCTGGTG
ACCGACAGCT CCCACATCGG CATTCTGCCC TCGGACCCGT ACCAGGTCCC GGCCGGCGAC
CCGCCGCAGT ACCAGTGGCT GGCCGACCAG CTGTCGGCGA ACCGCTCGCC GGTGGTCTTC
GTGGTCAGCC ACGTCCCCGC CTACGACCCG CATCCGCAGC AGGACAGCCA GTTCGCCGAC
CGCTGGGAGG CGCAGATGTT CGAGACGCTG GTCCAGAAGT ATCAGGACAC GCATCCGCAC
ACGCACGTCA TCACGCTGTT CGGCCACGCG CGCGGCTGGG CCGAGAACCT GCTCGACCCG
ACCGGCCACA ACACAGCCGG CGGCATCCCG AACTTCGTCG TCGCCGACGC GGGTGTCGAG
GCGTACGCGC CGCCAGCCGA GGGCGGGTTC TACAACTACG GGCTCTTCCA TGTGCTGCCC
AACGGAGACG TGCAGTTCGC GGCGATCCCG ACGCTGGCCG GCATCACGGT GAGCAGCCCG
GCGAGCACGC TGCAGGCAGG CCAGTCGACG CAGCTGACCG CGACCGGAAC CACGCCAACC
GGCGACGATC TGCCCGCCCT CAGCGTGCCG ATCGCCGATC CGGCCTCGCA TGTGTGGCGC
AGCTCCGATC CGCACGTGGC GACGGTCGAC CCGGTCACCG GCGCCGTGCA CGCGTGGCAC
GCGGGGACGG CGACCGTCAC GGTGACGTCG GACGGGATCA GCGGTTCGGT GACGTTGACG
GTCACGAAGG GTTGA
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| Protein sequence | MMVRRRRRLA VSATVVAALV CGALAGTGGA SAQTSGTDDT AAHSGGGDGR PWLPPTPDQW
PLVVTASNTA QQEITRGIDY QTDTYQTVGG VQHSTELNVD LSDPNVRLGV VESHNEINDA
ADEVPSSMAN RTGAVAGING DFFDIYGSGS PHGMVVIDGR LVKSPNPAWN QNVVVRADGS
IGMGAEAYSG TATDGAASHP ITSVNTVADL SANGLVRITP DLGDSGKIPA SVVATGHRDP
ADASVLIIDA VTPNVTDITQ VPAGTEDLVG SGTAGQWLTA TAHPGDRVTI AESISPDNAP
RQALSGGAIL VQNGTMAVPV QGSGENNVNN PVTGMGVTKD GKHAIVAVFD GHQPEDAAEG
LTRPQLAGWM IAHGAYNAMV FDSGGSSEMV ARQPGQQQVS VSNTPSDGHE RPVANGLFFY
STEPHPAPAV RAVANSGAPL AVLTNSTVPV GAYAVDTLGN PASDPVTLSV HPSSRASIST
GTNGATLTAS GTPGTGELVA TAGRAHSSVP LRVTDHLSSL TLSPATADLN NGGTQQLSVS
ATTRDKQPVS LLPASVAWTA SPPNLGSVDP TTGLFTAATD DEGLVTVTAS VDGASATTSI
AVGQRTEMVD TMTDVNNWAV NTHGGATGSL SLSTTTKRLP TDAGSMDVKY DIPAGSGVKQ
VVFSPTVSES FPPAGETQLP DGVGIWIKGS GTGGSGTPLG LGNLTLAEAY TEVNGQYVDF
YPSTVTYDGW QLIVANLPAG LQFPMSVKFL DFLVISPTQT LSGDLYVSDL QALYSPRPLV
TPPYVAIPDN PSWLQFTEDP AKFRAGGTTL AALDDAHTHA DDPNSTGSVV LKQDGTQIKA
LPSSQTGALS LQTMGDMSDT GSTANLTYLK SLLDGTGVPY HEGVGNHEIT QGADPENKNW
TSLFGATHYS YTQGAANILV TDSSHIGILP SDPYQVPAGD PPQYQWLADQ LSANRSPVVF
VVSHVPAYDP HPQQDSQFAD RWEAQMFETL VQKYQDTHPH THVITLFGHA RGWAENLLDP
TGHNTAGGIP NFVVADAGVE AYAPPAEGGF YNYGLFHVLP NGDVQFAAIP TLAGITVSSP
ASTLQAGQST QLTATGTTPT GDDLPALSVP IADPASHVWR SSDPHVATVD PVTGAVHAWH
AGTATVTVTS DGISGSVTLT VTKG
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