| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4164 |
|---|
| Symbol | |
|---|
| ID | 8335518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 4712074 |
|---|
| End bp | 4712691 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644957267 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_003114869 |
|---|
| Protein GI | 256393305 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.420537 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.04389 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCGG TGCGCGTCGG CCACGGGGTC ACCTCCGGGA CGTTCACGCT GGACGGCGAG
ACGTTCGAGG TCGACAACAA CGTGTGGGTG ATCGGCGATG AGACCGAGTG CGTGGTCATC
GACGCCCCGC ACTCGGTCGA GGGGATCCTC GCGGTCGTCG GCGGGCGCCG GGTGAAGGGG
ATCGTGTGCA CGCACGCGCA CGACGACCAC GTGCGCGTCG CACCGGAGCT GCGGGAGCGC
ACCGGCGCGC CGATCCTGCT GCACCCGGAC GACCGTCCGT TGTGGGAGTT GGTGCACGGC
GGACCGGAGG ATCCGGAGGC GACGCTGTGG GACGCCGATC TGAGCGATGG TCAGACGCTC
ACGATCGGCG ATGTCGCGTT GCAGGTGCTG CACACGCCGG GGCACGCGCC CGGCGCGGTG
TGTCTGTTCG CGGCCGAACT CGGGTGTGTG TTCACCGGCG ACACGCTGTT CCACGGCGGG
CCCGGGGCGA CGGGGCGTTC GTACAGCGAT CTTCCGACGC TGGAGGAGTC CATTCGCGCC
AAGCTGTTCG TGCTGCCGGA CGAGACGGTC GTGCACACCG GGCACGGCGA GGACACGACG
ATCGGCGCTG AGCGCTAG
|
|---|
| Protein sequence | MTAVRVGHGV TSGTFTLDGE TFEVDNNVWV IGDETECVVI DAPHSVEGIL AVVGGRRVKG
IVCTHAHDDH VRVAPELRER TGAPILLHPD DRPLWELVHG GPEDPEATLW DADLSDGQTL
TIGDVALQVL HTPGHAPGAV CLFAAELGCV FTGDTLFHGG PGATGRSYSD LPTLEESIRA
KLFVLPDETV VHTGHGEDTT IGAER
|
|---|
| |