| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4156 |
|---|
| Symbol | |
|---|
| ID | 8335510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 4698908 |
|---|
| End bp | 4699759 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644957259 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003114861 |
|---|
| Protein GI | 256393297 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.520818 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0517108 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAACC GCGATCTGGA CCGGCTGACG TATCTCCGTA CGCTGGATCC GGTTGGCGAC
CATGAGGAGA TTTACCGGAC GGTCGCCCAG TTCGAGTTCG GCTGGGAGAC CATGCTCGGC
CTGAATCTCG CCTTCTATCG GACGTTCGGT ATTCCGGCCA TCGCCGAACT GCTGTACTCG
ACCGGGGAGA TGACCGAGCG CACGCGCAAG CGCGCGGACG ACACCGGGCT GCTCATGTAT
GAGCTGATAA CCCATGGCCT GGAAGCCGAG CGCGGTCGCG CGGCCGTCAA GCGCCTGAAC
CAGATCCACC GCCGCTTCAC CATCGGCGCC GATGACTACC GCTACGTGCT GGCGACGTTC
GTCGTCGTTC CGACGCGGTG GATCGACCGC AGCGGCTGGC GCGCGCTGTG CTGTCACGAG
CGCACGGCGA CGGTCGAGTT CTACCGTCGG CTCGGCGAGC TGATGCACGT CACCGACATC
CCCGCCAGCT ACGCCGGCTT CGAGCACGTC CTCGACACCT ATGAAGCCGA GCACTTCGCG
CACACTGCGG CTGCCGAGGC CCTGATGGCA GCCACCCGAG GGCTGTTCGC CGGCCGGCTG
CCCGAGCGTC TCAAAGGTCT GGCAGGTCCG GTCGCCGATA CGCTGCTGTC GCCGCCGCTG
CGCGAAGCCG TCGGCGCCCC GACACCCGCG CTGCCGGTCC GTCTGCTCGT CAGTGGGCTG
ATTCGGCTGC GCGCGAGCGC CGAGGCGTGG AAGGCGCCGC GTACCGAGCC GTACATCACG
CTCGGCACGG CGCACAGCTA TCCGGAGGGC TATCAGGTTC AGGAGCTGGG ACCGGAGACC
GTAGAGCCCT GA
|
|---|
| Protein sequence | MRNRDLDRLT YLRTLDPVGD HEEIYRTVAQ FEFGWETMLG LNLAFYRTFG IPAIAELLYS
TGEMTERTRK RADDTGLLMY ELITHGLEAE RGRAAVKRLN QIHRRFTIGA DDYRYVLATF
VVVPTRWIDR SGWRALCCHE RTATVEFYRR LGELMHVTDI PASYAGFEHV LDTYEAEHFA
HTAAAEALMA ATRGLFAGRL PERLKGLAGP VADTLLSPPL REAVGAPTPA LPVRLLVSGL
IRLRASAEAW KAPRTEPYIT LGTAHSYPEG YQVQELGPET VEP
|
|---|
| |