Gene Caci_4135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4135 
Symbol 
ID8335489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4674242 
End bp4675669 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content72% 
IMG OID644957238 
ProductWGR domain protein 
Protein accessionYP_003114840 
Protein GI256393276 
COG category[S] Function unknown 
COG ID[COG3831] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.557555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGG GGACGACCTA TCTGGAGCTG TCCGAAGACA GCGGCAGCGC GCACAAGTTC 
TACGAGGTGA CGGTCGCCGG CACCGTTGTC GACATCCGCT ACGGCCGCAT CGGCACCGAC
GGCTCGCGGC AGACCTCGAC GTTCCCCACG ATCGAGAAGG CTGAGGCGGC GGCTGCCAAG
AAGATCGGGG AAAAGGTGCG CAAAGGCTAC GCCCCGTCGG TGATGGGTGC CCGCGCCGCG
CGCAGCATCA CCCGGCGCGC GGTCGTCTCC GCGCCCTCGA CGGCGCGGGC GACGGCGCCG
GTGTTGTGGC GGTTCCGGAC CGCCTCCAGC GCGTTCGGCA TCCACATCGA CGGCGACCGC
TGCTGGGTCG GCAACCAGTC CGGCGACGTG TACAGCCTCG GGCACGACGG GCAGGTGCTG
TCCCGGTTCT CGCTGCCGGA CGGCGTGAAG TGCCTGGTCG CCGACGACTT CTGGATCTAC
GCGGGCTGCG ACGACGGCTC CGTCTACGAC CTGTCCGGCA AGATCCCGCA CGCCGCCTAC
CGCATCGACG AGGACGTCGA CATCTACTGG CTGGACATCC ACGAGGGCGT CCTGGCGGTC
TCCGACGCCG GCGGGCGGCT GGTCGTCATC GACCACGAGG AGGAGCACCA GTGGTCGCGC
AACAGCCCGG GCACCGGCGC CTGGATGGTC CGCGGCGACG CCGAGGCGAT CTACCACGGG
CACAGCGCGG GCGTCACCGC CTACGCCGCC GACGGCGGCC GCGAGATCTG GAACACCAAG
ACCCCCGGGT CCGTGCTGTT CGGCTGGCAG GAATCAGACC ACGTATACGC CGGGACCGGG
CGCCACGTCG TCCACAAGAT CGCCAAGGCT GACGGCCGCG CCCTCGCCGA GTACCGCTGC
GACACCGCGG TCTACTCCTG CGCGACCGCC CCCGACGGTC GCTACGTCTT CGCCGGCGAC
AGCGCGTCGT CCGTCTACTG CTTCGCCGCC GACGGCACGC GCCTGTGGAA GCTCGGCACG
GGCTGCGGCT CGGCGCTGTC GATGCAGTAC CGCGACGAGC GCCTGTACGT CGTCACCACC
GACGGCTCGC TGGCGTGCAT CGACGCCGCC GAGCCGGCGA TCGCGGCGGC GCAGGGCGGC
GTCGTGCCGA CCGTGCTCGA CGTGAAGGCG AGCGCGGCCC TGCCGGTCGC CACCCCGGCC
ACCGTGGTCG CCACCACCAC CGTCGCCGGC TCCGGCACGG TCGTGGAGTG CATCGACGAC
CACGGCCGGG TCCGCGTGCG GGTCGTCGGC GCCGGCTTCC AGTCCGGCTG GAACGTGCAG
TTCCCGCGGG ACATGCGGGT GGTCGGGGCG CGCTACGTCG TGGAGGAGGT CCACGAGGCC
AGCCGCGGGT TCTACCGGGT GCGCGGGGAG ATCAAGCGGC TGGTCTGA
 
Protein sequence
MTQGTTYLEL SEDSGSAHKF YEVTVAGTVV DIRYGRIGTD GSRQTSTFPT IEKAEAAAAK 
KIGEKVRKGY APSVMGARAA RSITRRAVVS APSTARATAP VLWRFRTASS AFGIHIDGDR
CWVGNQSGDV YSLGHDGQVL SRFSLPDGVK CLVADDFWIY AGCDDGSVYD LSGKIPHAAY
RIDEDVDIYW LDIHEGVLAV SDAGGRLVVI DHEEEHQWSR NSPGTGAWMV RGDAEAIYHG
HSAGVTAYAA DGGREIWNTK TPGSVLFGWQ ESDHVYAGTG RHVVHKIAKA DGRALAEYRC
DTAVYSCATA PDGRYVFAGD SASSVYCFAA DGTRLWKLGT GCGSALSMQY RDERLYVVTT
DGSLACIDAA EPAIAAAQGG VVPTVLDVKA SAALPVATPA TVVATTTVAG SGTVVECIDD
HGRVRVRVVG AGFQSGWNVQ FPRDMRVVGA RYVVEEVHEA SRGFYRVRGE IKRLV