Gene Caci_4116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4116 
Symbol 
ID8335470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4650672 
End bp4651007 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content70% 
IMG OID644957219 
Productanti-sigma-factor antagonist 
Protein accessionYP_003114821 
Protein GI256393257 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCT TCGGTCACAC GGTCGCCGAG CACGGCGACC ATGTGCGGCT CGCGCTGATC 
GGCGACGTGG ACTTCGCGGC CCATCCGACG CTCATCGCGC AGCTCACCAC CCTGGTCGGA
GTCGGGCGCG CGGTCGTGGT GGACTGCTCG GCGGTGACCT TCCTGGATTC GATGGGCCTG
CGCGCGCTGG TCGAGGGCCG GCGCGCGGCG CAGATCGCGG GGGTGGGCTT CGAGCTGGCC
GACCTGTCCC GGCCGGTCCT GCGGGTGATC GAGCTGTCCG GAACCACCGA GTTGTTCACG
ATCCGCGGGC CGATAACCGA AGAGTACGGG CCCTGA
 
Protein sequence
MNTFGHTVAE HGDHVRLALI GDVDFAAHPT LIAQLTTLVG VGRAVVVDCS AVTFLDSMGL 
RALVEGRRAA QIAGVGFELA DLSRPVLRVI ELSGTTELFT IRGPITEEYG P