Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4093 |
Symbol | |
ID | 8335446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4619881 |
End bp | 4620849 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644957196 |
Product | hypothetical protein |
Protein accession | YP_003114799 |
Protein GI | 256393235 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0520376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0514778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACAC AGCACCACCA GAACAGCCCC CACCCGACCA AGCCCCCCAC GATCCAAGCC CTCTCCATGG GGGCCGGAGT GCAAAGCTCG GCACTCCTTC TGATGTCCGC CCAGGGACTG CTACCCAAGC TCGATTACGC CGCCTTCGCC GACACCGGCT GGGAACGCCC CGAGACCTAC GCCGCCCTGG ACCGGCTGGA GAACGAGGTC GCCAAGCCCG CCGGAATCGA GATCGTCCGC CTGTCAGCCG GCGACATCCG CCGCGACGCG CTCGACCCGA ACTCACGGTT CTCCACGATG CCGATGTTCA TCAAGAACCG CGACGGCTCC AAAGGCATGC TGCGCAGGCA ATGCACCTCC ACCTACAAGA TCAAGATCTT GCTTGCGGAG GCCCGCCGAC GCCTCGGGGC CGAGGTCTTC GACGACGGGC GCATCGGCCG CGTCAAGCGC AGCCAGCACC TGAACATGTG GGTCGGAATC AGCTCCGATG AGTTCCACAG GGCCAAGGAC TCCGGCGTGA AGTACGCCGT CAACACCTTC CCCCTGCTCG AGCTGGGTCT CACCCGCGCC GACACGCAGG CGTACCTCGA CTCCCACGGG TTCGCGGCCG TGTCCAAGAG TGCGTGTGTT GGGTGCCCTT ACACCTCAAA CGCTGGCTGG AGAAATCTGA GGGACAACCA CCCCGAGCAG TGGAACCAGG CCGTCGAGTT CGACCACGCC ATCCGCGAAG GCTCCGCCCG CGCCAACGCC AATGGCCGGC CGCTGCTCGG CCAGGCGTTC CTACACCCCT CGCTGCAGCC GCTGGACTCC GCGTCGATCG ACGCCCCGCC CAAGCGCCGA CACCTGCGCC TCGTCGGCGC CGACGAAGCC GACAACTGGG AGGACGGCGA CCCCGACGGC TGCTCACCGT GGGCCTGCCG CTCCGGACGA CCGGAGACCC CGCCGGGCTC CTCGGAGGTG GCCGCTTGA
|
Protein sequence | MTTQHHQNSP HPTKPPTIQA LSMGAGVQSS ALLLMSAQGL LPKLDYAAFA DTGWERPETY AALDRLENEV AKPAGIEIVR LSAGDIRRDA LDPNSRFSTM PMFIKNRDGS KGMLRRQCTS TYKIKILLAE ARRRLGAEVF DDGRIGRVKR SQHLNMWVGI SSDEFHRAKD SGVKYAVNTF PLLELGLTRA DTQAYLDSHG FAAVSKSACV GCPYTSNAGW RNLRDNHPEQ WNQAVEFDHA IREGSARANA NGRPLLGQAF LHPSLQPLDS ASIDAPPKRR HLRLVGADEA DNWEDGDPDG CSPWACRSGR PETPPGSSEV AA
|
| |