| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4039 |
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| Symbol | |
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| ID | 8335392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4567354 |
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| End bp | 4570479 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644957145 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003114748 |
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| Protein GI | 256393184 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.039203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0409603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATAC TCCAGGCGCT CGGCGCAACC GCGCGCGGCA TCACCCGCGT GGTGAAGGCG
CTGCTGGCCG CCGCGATCAC CATCGGCGTG CTCGCCGGCA TCCCGGCGGC CCTGCTGCAC
TACGCCGGGG ACCCGATCCC GCACTCGGTA CCGACCATGG ACGCGGTCAA GCACACCCTG
ACCAACCCCA TGACCCCGCA GATGCTGCTC AAGGCCCTGT CGGTCGTCGG CTGGTACCTG
TGGGCGATCC TGGCCGTCAG CTTCCTCGTC GAGCTGGTCT ATGCCGCACG GCGGGTCAAC
GCCCCGCACA TCCCCACCCT CGGGCCGACC CAGGCGCTGG CCGCCGCCCT GATCGCCGCC
ATCGGCATCA CCACCCTCCT GCGTGCCGCC CCCGCCCACG CCGCCGAAAC CTTCTCGGCC
TCCGCTCCGA CTGGCGGCCG GGTCGCAGCC ACCGCACCCG CGCTCGCCGG GACCGGCAGT
CTGTCCACCG CGCACCTCGC GGTCGGCAAC GCCAGCTCGG CCGCGCCACG CGAAAGCGTC
CACACAGTGA AGCCCGGCGA GTCGCTGTAC TCGATCGCCA AGGAAGACCT CGGCAGCGGC
GACGACTGGC CGGCCCTCTA CAAGATGAAC GCCGGCGTCG TCCAAGCAGA CGGCGACCAG
CTCACCAACC CAGACCTGAT CCGCCCCGAC TGGAAGATCC GCATCACGCC GCCCAGCGCC
GATCAGGCTC CCGCGACCAC TAGCACCACC ACCGCCCCGC CCACCAAAGC TCCCGCGCCG
TCGGCCCCGA AGGCGTCCGC CCCGGCGACG AGTGGCCCCA GCGCGCTGCC TTCGCCCGCT
GCTTCGCATA CTGCCGCCCC ATCCCCCGTC ACCCACGCAA CGCCTACGAA CGACGACCAC
CGGCAGGGCG ACCGCGCCGC GAAGCGCCAC GGCGGAGTCG CGGTCTCGCT GCCCGACGGC
GGAGCCATCG GCATCACCCT CGCCGTGGCG CTCGGGTCGG CGCTGGTCCT GGCCCGGCGC
TGGCGCACGC GGCGCGCCGA CCCGCGCCTG CCGATCGCCG AGCCGCCGCT TCCCGGGGCG
CTGCTGGCCG CCCGCCGTGC CCAGCGGTCC CTGGCCGCCG CCCAGCACAG CCTGGCCGCA
TCGCCCGAAG ACGCAGTCCA CGACGAGGAA CACGACGACC TCTTCGACGC CAAGGGGATC
GAAGACCTTG ACGAGGACGC CTTCGGCGCT GATCAGAACC TCATCGGCGA CGACGCTGAC
AGCTGGGACG ACGCCGAGGA GCTGGACGAG TTCGGCGCGC CGGCCGGTCC CTTGCCGGAG
CCTACGGTGA CGCGCTTTGC CGAGCCGCTG CCGCCGGGCT CGATCGGCGC CGCCGAGCGC
GACGGCGTCG AGCTGCCGCT GACCCCGACG GGCACCGGCC TGGGCCTGGT CGGCCCCGGA
GCCGCCGGGG CCGCCCGCGC GATCGCCGCC TCGGTGCTGT CAGCGGGCTC GCCCGAGCGC
ACCGCCGACC TGGCCAGGCT CATCATCCCG GCCGCGGACC TGGCCGCGCT GCTCGGCGTC
GACGAGTCCG AGCTGCCAGC CATCACCCGC GGGCTTCCCG AACTATTCGC CACCAAGGAC
CTGGCCACCG CGATCGGCGA AGCCGAAGTC CACGCGCTGC TGCGCACCCG GCTCCTGGAG
GAGTACGAGC AGCCGGACCT GGACGCGCTC GCCGCGGCGC ACCCGGACGT CGAGGACTGC
CCGCCGCTGG TGCTCATGGC CTCCCCGGCG CGCGCTCTGA GCGCGCAGAT CGCCGCCCTG
ATGAACACCT CCGCGTGTCT GCGGATCACC ACCGTCCTGC TCGGCGCGCA CCCGGACGGG
CCGACCGCCT TCGTCGAAGC CGACGGCACC GCCACCGGCC CCGCTGTCCG AGACTGGTCC
GGCGCCAGGC TGTGGAACCT GAGCGCGCCC GCCCTGGCCG ACATCCTGGA CCTGCTCGCC
CGCGCCGCCG GCCACGATCC CGGCACTCCG GGCGGCCAGG CCGAACCAGA CGACTGGCCG
GAGACCCCCC CGGCCCACGA CGCCGCAGAG CGCGCGGCGG CCGACGAGAA CGACGGCGGC
GAGGCGACGA TCACCGTCCT GCCCGTGCGC CCCATGCCGG ACCGGCAAGC CGACCCGGTC
GGCGACGACC ACGAGGAGCG CACGCTCACC GACTCCCCTG TGGCAGGTGC CAACACCGCA
TCCCTGGCCC CGGTGACCAT GCTGCCGGTG CGGCCCGCCC CGGACAGGGC GCTCGCCGAC
GCGGCGCGAA CCAGCGCCGA CGTGCGCGCC GAGGCGGCGC TGACGGCATG GAACGAAAAC
CCGATACGGA TCAACGTGCT AGGCGGACTG AACATCACCG CAGGCGGGCA GTCAGTGTCC
GGGCTTCGCA CCTCGGCCCG CGTGCTGGCC GCGCTGCTAG CAGTCAAGGG GTCCGCGGGC
GCCAGCTCCG AGCAGATCGA CGCGATGTGC TGGCCCGACG CCAACCCCCA GGAGATGGAC
CGGATCGCCA AGTGGCGTGC CGACGGCCTC AACTCCCTGC GTAAGCGCCT GGCCGCGGCC
ATGGGCCAGC GCAGCCCCCG GCTGGTCCTG CTCGACCGGG CCACCGGCCG CTACCGGCTC
AATCCCGAGC TGGTTGCCAC CGACCTGGGC ACGATCGCCG AGCTGACCGC CGCCGCCCGC
AGCGCCGGTG ACACCGAGCA GCGCCTGGCG CTGCTGGCCG CCGCCGAACC GCTGTGCCGC
GGAGCGCTGC TGGACGGAGA ACTCGGCGAC AATTTTGACT GGAGCGCGGA CTTCATCGCG
ACCGTCGCCG ACGAGCAGGT CGCCGTCCTG GCACGCCTCG CGACGCTGGC CGCTGATTCC
CGGCCGGACC AGGCCCTGGC GGCGCTGGAG AAGGCCGCCG CGTTCACCGA GGACAACGAG
ACGCTGTACC AGCAGATGTT CGACATCCTC GCTGAGGCCG GACGGCACAG CGAGATCCCC
GGCAAGCTGC GAACCCTCGA GGCGTACGCC GACTCCCTCG GGGCCGGCGT CTCGACAGCG
ACCCGCGAAG CAGCGGCGCG CGCGATGAAG CGCCAGCCGC AGCAAGGGGT CCGCCAAGGG
CACTGA
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| Protein sequence | MAILQALGAT ARGITRVVKA LLAAAITIGV LAGIPAALLH YAGDPIPHSV PTMDAVKHTL
TNPMTPQMLL KALSVVGWYL WAILAVSFLV ELVYAARRVN APHIPTLGPT QALAAALIAA
IGITTLLRAA PAHAAETFSA SAPTGGRVAA TAPALAGTGS LSTAHLAVGN ASSAAPRESV
HTVKPGESLY SIAKEDLGSG DDWPALYKMN AGVVQADGDQ LTNPDLIRPD WKIRITPPSA
DQAPATTSTT TAPPTKAPAP SAPKASAPAT SGPSALPSPA ASHTAAPSPV THATPTNDDH
RQGDRAAKRH GGVAVSLPDG GAIGITLAVA LGSALVLARR WRTRRADPRL PIAEPPLPGA
LLAARRAQRS LAAAQHSLAA SPEDAVHDEE HDDLFDAKGI EDLDEDAFGA DQNLIGDDAD
SWDDAEELDE FGAPAGPLPE PTVTRFAEPL PPGSIGAAER DGVELPLTPT GTGLGLVGPG
AAGAARAIAA SVLSAGSPER TADLARLIIP AADLAALLGV DESELPAITR GLPELFATKD
LATAIGEAEV HALLRTRLLE EYEQPDLDAL AAAHPDVEDC PPLVLMASPA RALSAQIAAL
MNTSACLRIT TVLLGAHPDG PTAFVEADGT ATGPAVRDWS GARLWNLSAP ALADILDLLA
RAAGHDPGTP GGQAEPDDWP ETPPAHDAAE RAAADENDGG EATITVLPVR PMPDRQADPV
GDDHEERTLT DSPVAGANTA SLAPVTMLPV RPAPDRALAD AARTSADVRA EAALTAWNEN
PIRINVLGGL NITAGGQSVS GLRTSARVLA ALLAVKGSAG ASSEQIDAMC WPDANPQEMD
RIAKWRADGL NSLRKRLAAA MGQRSPRLVL LDRATGRYRL NPELVATDLG TIAELTAAAR
SAGDTEQRLA LLAAAEPLCR GALLDGELGD NFDWSADFIA TVADEQVAVL ARLATLAADS
RPDQALAALE KAAAFTEDNE TLYQQMFDIL AEAGRHSEIP GKLRTLEAYA DSLGAGVSTA
TREAAARAMK RQPQQGVRQG H
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