| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4032 |
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| Symbol | |
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| ID | 8335385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4563452 |
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| End bp | 4564342 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644957138 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003114741 |
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| Protein GI | 256393177 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.304186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00325019 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACTCCG GGCTGCTGAC CGCAATCCTG TGCGGCCTGG GCGTGGCGGC GGGAATCACG
CTCATGCTGC GCGGCCTGAT CGGCGTGCCA GCCGACGCGG AACCGAAGAG CCCCGGCGCC
GAGGAGCTGC TGGAGCGGCT GAAAGCACCA GGCATCACCC GCAGGGTGCT GATCTCGGCC
GCCGCAGCGG TGGCCGTTGG GGCGTTTACC GGATGGCCGG TCGCGGCGGG AATCGCCGCG
CTGGCCGCCT GGGCGCTGCC GGGCATGTTC GGCAAGGACG GCGCCGCGGC CGACGAGCAG
GCGCGTATCG AAGCGATCGC GACGTTCACC GAGGCGCTGC GCGACACCCT GGGCGCGGCG
GCGGGTCTGG AGCAGTCGAT CCTGGCCGCC GCGGCCAACG CGCCAGCTCC GATCCGCGCC
GAGGTCGCAG AGCTGGCGGC GAACCTGAAG GCCGGGACGC GGCTGGACGA GGCGCTGCGC
ACGTTCGCCG CGGACCTCGG CGATGCGACT GGCGACCTGG TGGTCGCAGC TCTCGTACTG
GCCTCCCGCC AGCAGGCACG CAACCTCGGC GAAGTGCTGG GCGAGCTTGC CCGGTACGCC
CGGGAACAGG CCGCGCAGAG CATGCGGATC ACCGCCGACC GGGCTCGCAC CCGCTCCTCG
GTGCGGATCA TCGTCGCGTT CGTCTTCGCG GTGGCTGGGG TGCTGGTGGG CATGGACGGC
TCCTACATGA CCCCCTACAG CAGCCCGGCC GGGCAGATCG TGCTCGCGGT GGTCGCCGGG
GTGTTCGGCG TCGCGTTCAT GTGGCTGCAC AAGATCGCCG CCACGAATCA GCCGACCCGG
TTCCTGACCC GCCTGCAGAC CAACCCGACC GATGAGGGGG CCACACGATG A
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| Protein sequence | MNSGLLTAIL CGLGVAAGIT LMLRGLIGVP ADAEPKSPGA EELLERLKAP GITRRVLISA
AAAVAVGAFT GWPVAAGIAA LAAWALPGMF GKDGAAADEQ ARIEAIATFT EALRDTLGAA
AGLEQSILAA AANAPAPIRA EVAELAANLK AGTRLDEALR TFAADLGDAT GDLVVAALVL
ASRQQARNLG EVLGELARYA REQAAQSMRI TADRARTRSS VRIIVAFVFA VAGVLVGMDG
SYMTPYSSPA GQIVLAVVAG VFGVAFMWLH KIAATNQPTR FLTRLQTNPT DEGATR
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