Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4029 |
Symbol | |
ID | 8335382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4560589 |
End bp | 4561281 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644957135 |
Product | SAF domain protein |
Protein accession | YP_003114738 |
Protein GI | 256393174 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.177398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00623297 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTACCT CCATGCCGAA AATGGCCCCG GTGAAGATCT CCGGACGTCT GGGCGGCTCG GCGAAGAAGG CTGAGCCGCG TCTGTCGCCG GCGGCGAAGC GCCGCAGCGT GCCCTACGCA GTCCTCGGCG GCGCGCTCGC GGTGGTGTTC GCGGTCGGGT TCGCGGCGAC CTCGCTGAAC TTCGGCGGGA AACAGTCGTA TCTGGCGGTG GTGAAGCCCG TGCGCGCCGG GCAGGTCATC CAGGCGTCCG ACCTGGCCAC GGTGCAGGTG GCCACGAATG CAGGTCTGGG TCTGATCCCG GCCTCAGCGC AGAACTCGGT GGTCGGGCAG GCTGCGGCGC TGCCGCTGGC CCCCGGTGCG CTGGTGACGC GACGCGAGGT TGGCCCGGCC AGCTTCCCGC CTGCCGGGCA GCAGGTGATC GCGGTGGCGG TGAAGACCGG GCAGTACCCG ATGGAGCTGG CTCCCGGCGC GCACGTGATC GTCGGCACCG CTCCGGCGTC CGGCAGCTCG GGCACCGCGA CGGTGACGCC GCTGTCGGCC GCGCCGAGCG CGGTGGTGCT GTCGATCACA CCGGGCACGG ACTCCGGTAC GGGCTCGGTG TCCTTGCTGG CCGATGCTGG TTCTGCTTCG GCGATCGCGG CGATTCCGGC CGCGCAGGTG CAGCTGGTGC TGTCCGCTCC GGCGGGGAGC TGA
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Protein sequence | MATSMPKMAP VKISGRLGGS AKKAEPRLSP AAKRRSVPYA VLGGALAVVF AVGFAATSLN FGGKQSYLAV VKPVRAGQVI QASDLATVQV ATNAGLGLIP ASAQNSVVGQ AAALPLAPGA LVTRREVGPA SFPPAGQQVI AVAVKTGQYP MELAPGAHVI VGTAPASGSS GTATVTPLSA APSAVVLSIT PGTDSGTGSV SLLADAGSAS AIAAIPAAQV QLVLSAPAGS
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