Gene Caci_4013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4013 
Symbol 
ID8335366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4544620 
End bp4545438 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content67% 
IMG OID644957119 
Productaminoglycoside phosphotransferase 
Protein accessionYP_003114722 
Protein GI256393158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.163543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00393524 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGCGCG CGACCTTCAC CGACCTACCC GATCAGGTCC TAGCCGAGCT GGCCGACCTG 
GCGGGGCCGG TCAAGGAGTT CATCCCCGCT GTTCTCGGCA ATCACGCCGA CGTGGTCGGG
GAACTGCGCA CCAGCCGGGG GCGGGCGTTC ATCAAGGGCG CCCGCCTCCT CCCAAACCAG
CGCGGCGGAG GCGCCGAGGC CTGGTCGCTG CTGAACGAGG CCGAGGTTCT GCACGCGGTC
CGGCCGTACG CCCCTGAACT GTTGTGGCGG TTCGATGTGG CCGGCTGGCG GATCGTCGGC
TTCGAGTTCG TGCACGGGCG CCACGCCGAC TACGCACCCG GCTCCCCAGA CCTGGAGCCG
ATCTCCGTCG CAGTAGAAGA ACTCGCCACG CGGGATTGCC CGCCGTCGGT GAAACTGCGG
GTTGAAGATC GGTACCGGGC GCTGGACGAC CGTGCTGGAG TGTTCGCCAG TGATGGCCTG
GTGCACTGCG ATCTGAGCCC AGACAATGTA CTGATCACTG TCGACGGCGC GGTCCGCATC
GTGGATTGGG CGTTCGTATC GCGCGGCGCC TCCTGGCTGG AGTTCGGCTT CATGATGCCG
TGGCTGATCC GTGCAGGACA CAGCCCACAG GCTGCCGAAT CGTGGCTGGC CCGGTTCCCG
CTGTGGAGCA GCGCAGACCC GGAGCACACC AACCTGTTTG CTTCCCTCTT GAACCAGACC
TGGTCGCGGC GGAACGTCGA AGGCGCCCCT CCATGGCTGG TCGAATACGC CGGGTTGGTC
CGGGCATGGC TCGAAGCACG GACAGCAACA AGCTCCTGA
 
Protein sequence
MVRATFTDLP DQVLAELADL AGPVKEFIPA VLGNHADVVG ELRTSRGRAF IKGARLLPNQ 
RGGGAEAWSL LNEAEVLHAV RPYAPELLWR FDVAGWRIVG FEFVHGRHAD YAPGSPDLEP
ISVAVEELAT RDCPPSVKLR VEDRYRALDD RAGVFASDGL VHCDLSPDNV LITVDGAVRI
VDWAFVSRGA SWLEFGFMMP WLIRAGHSPQ AAESWLARFP LWSSADPEHT NLFASLLNQT
WSRRNVEGAP PWLVEYAGLV RAWLEARTAT SS