Gene Caci_3993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3993 
Symbol 
ID8335346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4526651 
End bp4527007 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content69% 
IMG OID644957107 
Producthypothetical protein 
Protein accessionYP_003114710 
Protein GI256393146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0690307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0482358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAGG TAGGCGACAT CCGAGAGTGG CGCGGCCACG ACGTGGTCGA CCCGGGAAAG 
CACAAGATCG GGACGCTGGA GTCCGTGTAT GTGGACGTCG CGACCGACGA ACCGTACTTC
GCCGCGGTCA CTGTCGGGCT GCCCACCCGA CACCGCCTGG TCTTCGTACC CCTGACCGGG
GCGGTGGTGG GGCCAGGCTA CGTGCAGGTC GCCCACCCGA AGGCCCAGGT GAAGGGTTCG
CCGGCGATCG GCACCGACGA CGAGCTGCCG GTCGAGGACG AGCAGCCGAT CTTCGTGCAT
TACGAGCTGA CCTACACCCC GGGCGCCGCC GGCGAACGGC GCCTGGCCCG TCGCTGA
 
Protein sequence
MIEVGDIREW RGHDVVDPGK HKIGTLESVY VDVATDEPYF AAVTVGLPTR HRLVFVPLTG 
AVVGPGYVQV AHPKAQVKGS PAIGTDDELP VEDEQPIFVH YELTYTPGAA GERRLARR