Gene Caci_3983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3983 
Symbol 
ID8335336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4517089 
End bp4517940 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content72% 
IMG OID644957097 
Producthypothetical protein 
Protein accessionYP_003114700 
Protein GI256393136 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.104291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.524901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCG TCAACGGTGG CTGGGAGCTG CCGATCAGCG AGGGCGAGCT GTCCCGCATG 
ACCCGGGACC TGGACCAGGC GCACCGCGAG TATCTGCCGT CGATGCACGC CGCGGCCGCC
GACCTGTCCG AGCAGCTGCG CGACTCCGAC GTCCTGGCCG AGGCACGACA AGAACAGCTG
CGCGTGGCCT CGCGGCGGCG GTTCCTCATC GGAGCCGGCG GAGGCGCCGC CGCCCTGGCG
CTGGCGGCCT GCTCCAGTAG CAAGTCGACC AAGGCGGCCC CCGCCCCTGG CAGCAGTACC
GCCCCGACGC CCTCGACGCC GATGTCGTCC TCCTCCAGCG CCAGCGTCTA CACCGGAGAC
CTGAAGGTGG TCGCGCTGGC CACCGCGCTG GAGAACCAGG CCGTGGCCGC CTACACCGCG
GCGCTGGCGG CGGCGAAGGC CGGCAAGCTC GGCACGGTAC CGCCGGCGGT CGGCACGTTC
GCGACCACCG CGATGAGCCA GCACACTGAC CACGCCAAGG CCTGGAACGC GGTCCTGACC
GGCGCCAAGG TGCCCGCGAT CACCGACGTG CCGCTGTCCA ACCAAGCGGC GACCCTCGCG
GCTCTGGGCG CGGTCACCGA CGTCGGCGGC GTGGCCAAAC TGGCCCTGCA GCTGGAGCAG
CAGGCCGCTG AGACCTACCT GTTCGCGGCT GCGAACGTCA CCAGCCCCGG TGGCATCGCC
ACCGCCGCAA GCATCGCGCC GGTAGAGGCC ATGCACGCCG CCATCCTGAA CTTCGTCATC
GGGCAGTACC CCGCCCCCGA CGACTTCCTC GGCACCGACA AGGCCGCCAG CCCCACCCTG
CTGACGGTCT GA
 
Protein sequence
MSTVNGGWEL PISEGELSRM TRDLDQAHRE YLPSMHAAAA DLSEQLRDSD VLAEARQEQL 
RVASRRRFLI GAGGGAAALA LAACSSSKST KAAPAPGSST APTPSTPMSS SSSASVYTGD
LKVVALATAL ENQAVAAYTA ALAAAKAGKL GTVPPAVGTF ATTAMSQHTD HAKAWNAVLT
GAKVPAITDV PLSNQAATLA ALGAVTDVGG VAKLALQLEQ QAAETYLFAA ANVTSPGGIA
TAASIAPVEA MHAAILNFVI GQYPAPDDFL GTDKAASPTL LTV