Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3980 |
Symbol | |
ID | 8335333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4514650 |
End bp | 4515390 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644957094 |
Product | hypothetical protein |
Protein accession | YP_003114697 |
Protein GI | 256393133 |
COG category | [S] Function unknown |
COG ID | [COG5343] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.24724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.367091 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCCGG AAGTCCACTC ACTGACGGGT GCCTACGTCT GCCACGCGCT GGAACCCGCA GAGCGCGCTG CTTTCGAACG CCATCTGGCC CAGTGCGCCA CCTGCGCGCA GGAAGTGGCT GAGCTGCAGG AGACAGCGGC GTTGCTGGCC TCGGCCACGG CCCAGACCCC ACCGGCCCGG CTGAAGACCG CGGTCGACGC ACGAATCGCC GTTACCCGGC AGATCCCCCC GATCATCGTC CACGCCCCGG CACGCCCAGC CGTCACCCGA CCCAAGCGTC GCTGGTTCAC CGCTCTGGGC TGGGGCCTGG CCGTGAGTCT GGCCGCGGTC ACAGCAGTAC TGGGCGTCCG GATGGACGAC CAGCAGCACC GGATCGACCA GGCCCACCAG CAGAACATCA CGATCACGAC ACTGCTGTCC GCGCCTGACG TCCATACCGG CAGGGTGATC GTGAGCACCG GCGGAACCGG CACGGTACTC CTCTCCCGAT CCAACGACGA AGCCTCCATC ACCGTCAGCG GACTGGCGAA GCTATCACCG GGCCACACCT ACCAGCTGTG GATGATGGGA CCGTCGGGAA CCCGCTCCGG CGGACTGCTG CCGCCGGGGT CTCGGTCTTC TGACTCGGTC CTGGCACGCG GCCTCGGCGA CGCGCAGACC ATCGGGCTCA CCGTCGAACC CACCGGTGGT TCGGCTCAGC CGACGACCAC GCCGATCATG CTGCTGCCGA TGCCCGCTTA A
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Protein sequence | MDPEVHSLTG AYVCHALEPA ERAAFERHLA QCATCAQEVA ELQETAALLA SATAQTPPAR LKTAVDARIA VTRQIPPIIV HAPARPAVTR PKRRWFTALG WGLAVSLAAV TAVLGVRMDD QQHRIDQAHQ QNITITTLLS APDVHTGRVI VSTGGTGTVL LSRSNDEASI TVSGLAKLSP GHTYQLWMMG PSGTRSGGLL PPGSRSSDSV LARGLGDAQT IGLTVEPTGG SAQPTTTPIM LLPMPA
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