| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3978 |
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| Symbol | |
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| ID | 8335331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4512850 |
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| End bp | 4513593 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957092 |
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| Product | peptidase C60 sortase A and B |
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| Protein accession | YP_003114695 |
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| Protein GI | 256393131 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.107893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.372748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCTGGC TGACAAGGCT GTTCGGAAGT GGCCGCCGGC GTCTGCTGGC GTCGGCGGCC
GCCGTCCTGC TGCTGGCTTC GGCGGGAGGG CTGGCGCTCG GGTTCGCGGC GCAGCACCAC
CCGCCGCAGC CTCCGGCTTC GGCCGCGCTG CCGGCTGCGG GAGTGCCGAA CGCGGCGAGC
GCCGGAACGA CGCCGAGCAC TTCACCAGCG CCGGCCTCGC CTTCGCCCGC CGCAACGCCC
GCAACGCCCG CAGCACCGAC GAAGCCAGCC GCTCCAGCCA CTCCAACCGC CGCACCCACC
GCGATCAGCA TCCCGGAGAT CGGCGTGCAC CACACCCTGA TCCAACTCGG CCAGAACTCC
GACGGCACCA TCCAGACACC GCCGCTGACC GACCCCTCGA TTCCGGGCTG GTACCGCTAC
TCCCCCGCAC CGGGCCAGGT GGGACCGTCA GTCATCGTCG GACACATCGA CGGCACGACC
GGCGCCAAGG GCGTCTTCTA CAACCTGGGC GCGCTGCGTC CCGGTGACAC CGTCGACGTC
AGCCGCAGCG ACGACACCGT GGCCGTGTTC CGGATCGACG GCATCAACAA GTACGCCAAG
AGCGCCTTCC CCACCGCGAC CGTCTACGGC AACACCACCA ACCCGCAGCT GCGGCTGATC
ACCTGCGCCG GACCGTTCCA GAACCAGCAC TACCTGGACG ACATCGTCGT CTACGCCAGC
TTGACCGCGA TCCACCCGGC CTAG
|
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| Protein sequence | MSWLTRLFGS GRRRLLASAA AVLLLASAGG LALGFAAQHH PPQPPASAAL PAAGVPNAAS
AGTTPSTSPA PASPSPAATP ATPAAPTKPA APATPTAAPT AISIPEIGVH HTLIQLGQNS
DGTIQTPPLT DPSIPGWYRY SPAPGQVGPS VIVGHIDGTT GAKGVFYNLG ALRPGDTVDV
SRSDDTVAVF RIDGINKYAK SAFPTATVYG NTTNPQLRLI TCAGPFQNQH YLDDIVVYAS
LTAIHPA
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