Gene Caci_3966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3966 
Symbol 
ID8335319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4500419 
End bp4500811 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content65% 
IMG OID644957082 
Productprotein of unknown function DUF190 
Protein accessionYP_003114685 
Protein GI256393121 
COG category[S] Function unknown 
COG ID[COG1993] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0280785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.332101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCTGT CCGGACCCGC ACGGCGCCTC TCCATCTTCA TCGGCGAAAC CGACCAGTAC 
CACCACCACG CGCTCTACCA CGAGATCGTG ACCCGAGCGA AGGAAGCAGG ACTGGCCGGG
GCCAGCGTGT TCCGCGGCAT GGAAGGTTAC GGCGCCACCT CGCGCATCCA CACCACCGCC
ATCTTGTCGC TGACTGAGGA CCTGCCACTG ATCATCATCA TCGTCGACAC CACCGAGAAG
ATCGACGCCT TCCTGCCGCA GCTGGACGAG CTGATCGGCG AGGGACTGGT CATCATCGAC
GACGTCGAGG CCATCACCTA CACCGGCCGC AGCCTGGAAA CGCCCCGCGA GGGCGAGGCC
GACCACCGCA AGCACCGATG GGGCCACTCG TGA
 
Protein sequence
MKLSGPARRL SIFIGETDQY HHHALYHEIV TRAKEAGLAG ASVFRGMEGY GATSRIHTTA 
ILSLTEDLPL IIIIVDTTEK IDAFLPQLDE LIGEGLVIID DVEAITYTGR SLETPREGEA
DHRKHRWGHS