| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3961 |
|---|
| Symbol | |
|---|
| ID | 8335314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 4496811 |
|---|
| End bp | 4497836 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644957079 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_003114682 |
|---|
| Protein GI | 256393118 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0287071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.340574 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTTGC TGTCGGCACA GAAGATGCCG GTGGCGAAGA TCGCCGAGGT GACGTTCACC
AGCGAGGACC GGGTCCGGGA CGTCATCCAC AACTTCAACG CCGATGGGTT CGACTCGCTG
TACCCGAAGT ACGTCGGCGG CCGACCGCGC ACGTTCAACC TGCCTGAGCG GCGGGAGATC
AAAAAGCTCG CGAAGTCGAA GCCGGTTGAG CACGGCCTGC CGTTCTCCAC GTGGAGCCTG
TCCAAGCTCG CGGACTTCCT GGTAGCCGAG GGGGTGGTCG ACGACATCTC CCACGAGGGC
CTGTGGGTCC TGCTCCGTGA CGAAGGCGTC TCGTTTCAAC GCCTGAAGAC CTGGAAGACC
TCCAAAGACC CGGACTACGC GGTGAAGAAG GCCCGGGTCG AGCACCTGTA CGCGATCGCC
GACGGCGAGG TGATACCCGA GCCTGGCGAG CCGACGGTCG TGTTCTGCCT GGATGAGTTC
GGGCCGCTGA ACCTGATGCC GCACCCGGGC CGGCACTGGG CCGCGATCGC TGGCAAGAAC
AAGGACCCCG ACCGAGAACC ACGACCGCGC CGCCGGGCCA CCTACAACCG GAACGACGGC
GTCCGGCACC TGTTCGCCGC CCACGACCTG ACCCGGGACC GACTGTTCGG GCACGTCAAA
CCTCGTAAGA AGCGCACCCA GTTCTTGGAG CTCTGCCGCT ATCTGCGCAG TCTCCACCCC
GCAGATGTAC GAATCGCGAT CGTATGCGAT AACTACTCGC CGCATCTGAC GACCAAACGC
TGCCGCAGAG TGTCCGGTTG GGCCGAGGCC AATAATGTCG AGATCGCCTA CACCCCGACC
AACAGCTCAT GGATAAATCG CATCGAGGCC CAGTTCACCG CGCTGCGCTA CTTCGCCCTG
GACGGCACCG ACCACCGCAG CCACCGTGAA CAGGGCAGCA TGATCCGCCG CTACATCATC
TGGCGAAACC GTCACGCCGA CGACACCCGG CTACGCCGAA TAGTCGCCAA GGCGAACGTG
GCCTGA
|
|---|
| Protein sequence | MVLLSAQKMP VAKIAEVTFT SEDRVRDVIH NFNADGFDSL YPKYVGGRPR TFNLPERREI
KKLAKSKPVE HGLPFSTWSL SKLADFLVAE GVVDDISHEG LWVLLRDEGV SFQRLKTWKT
SKDPDYAVKK ARVEHLYAIA DGEVIPEPGE PTVVFCLDEF GPLNLMPHPG RHWAAIAGKN
KDPDREPRPR RRATYNRNDG VRHLFAAHDL TRDRLFGHVK PRKKRTQFLE LCRYLRSLHP
ADVRIAIVCD NYSPHLTTKR CRRVSGWAEA NNVEIAYTPT NSSWINRIEA QFTALRYFAL
DGTDHRSHRE QGSMIRRYII WRNRHADDTR LRRIVAKANV A
|
|---|
| |