| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3916 |
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| Symbol | |
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| ID | 8335269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4446267 |
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| End bp | 4447919 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957040 |
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| Product | thiamine pyrophosphate protein central region |
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| Protein accession | YP_003114643 |
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| Protein GI | 256393079 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0769701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.56258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTCT ACGAAGCACT CGCCGAGGCG TTTGTCGCGG AGGGCACCAC CGACGTGTTC
GGCATGATGG GCGACGCCAA CATGCACTGG ATGCACGCGC TCGCCCAGCA GGACGTGCGG
CTCTACGAGG TCCGGCACGA GGGCTCGGGC CTGGGCATGG CGGACGGCTG GGCGCGCACC
GCCGACCGGC CCGGCGTGGT GACCACGACC AGCGGCCCGG GCGCCGCGCA GCTCGCCACC
TCGATGATCG TGGCGAGCCG GGCCCGCACC CCGCTGGTGG CCTTCTGCGG CGAGACCGAG
TGGGGCGACG AGGGCGCCGT GCAATATCTG GACCAGCGGC GATTCGCCGC GGCGATCGAG
TGCGAGTTCG TCCACGTTTC CCGTGCGGAC TTCGCTCAGG AGGCCGTGCA GCGCGCCTTC
TTCCTGGCTC GCACGCAGTC CCGCCCGGTG ATGCTCAGCG CACCGATCGA CATTCAGCAG
CAGGAGTTCG ATCAGGGCGC GCCGTACGTC CCCTCGACCG AGCTCATCGG CACCTCGCGG
CTGCTGCCCG ATCCGGCGCG GGTCCAGCTG GTCGCAGGTC TCGTCCAAAC CAGCAAGCGG
GTGGTGGTCA TCGCCGGCCG GGGTGCGAGG CGCTCGGATG CCGGACGGGA GATCCTTCGC
CTTCAGGAGC GCACCGGCGC TTTGCTGGCG ACCACGCTGC AGGCGAAGAA CTGGCTGTGC
GGCGACAGCG AGTTCCACGT GGGCATCTCA GGGCTCTTCG GCAGCAAGGT GGCGATGGAG
CTGCTCCAGG AAGCCGACTG CGTGATCGCG GTCGGCGCAA GCCTGAACAG CTACACGACC
GAGCACGGAT ATCTGTTCCC CGACGCGAAG TACGTGCAGA TCGACACCGC GCCGCATCTG
GTCATGGGCA ACGGGAGAGC GGCCGACTGC TACCTCCAGG CCGACGCTGC CACCGCCCTC
GTGGAGCTGA ACCGGGTCCT GGCCGAGCGC GCGGTCCGAA CGGAGGGCTT CCATACCGCC
GACGTCAAGC GCCGCCTGGA CGAAGCGTTG GAACCGCCGG CCGAGTACCA CCGCGAGCCC
GGTCTGCTTG ACCCGCGCGA GGCGATCCGC GTACTGGACT CCGATCTGCC CGGCGAGATC
GGCCTGGTTC TGGGCAGCGG GCACCAGACG GACTTCGGCA CCATGCTCTT CCAACGCTCG
CGAGAGGTGC TGTCCAACTA CGGCATGTTC GGCGCAATCG GCCAGGCCCC GCTGCTGACC
ATCGGATCGA TCATCGCCGA CGGCAACAAG CCGGCGTTCG TGGTGGAGGG CGATGCCAGC
TTCCTGATGC ACCTGTCGGA GTTCGAGACC GCAGTCAGGT ACGGCGTTCC CATCCTCGTG
GTGGTGATGA ACGACGAAGG TCTGGGCGCG GAATATCACA AGGCTGCGGC CAAGGGCCTG
GACCCGAACC TCGCGGTGAT CTCGACGCCG GAACTCGGCG GGGTCGCCGA GGCACTCGGC
GGCAGCGGCG CGACGGTCCG CACTGTCGAG GAGCTGAAAG CTGCGCTGGC CCGGTATGTC
GCGGCGCCTG GACCGACCGT GATCGATGTC CGGATCACGC GGGAAGTCCT CAGCATCCCC
TACCGCCGCC TCCAGTACGG GGAGGACGTC TGA
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| Protein sequence | MKVYEALAEA FVAEGTTDVF GMMGDANMHW MHALAQQDVR LYEVRHEGSG LGMADGWART
ADRPGVVTTT SGPGAAQLAT SMIVASRART PLVAFCGETE WGDEGAVQYL DQRRFAAAIE
CEFVHVSRAD FAQEAVQRAF FLARTQSRPV MLSAPIDIQQ QEFDQGAPYV PSTELIGTSR
LLPDPARVQL VAGLVQTSKR VVVIAGRGAR RSDAGREILR LQERTGALLA TTLQAKNWLC
GDSEFHVGIS GLFGSKVAME LLQEADCVIA VGASLNSYTT EHGYLFPDAK YVQIDTAPHL
VMGNGRAADC YLQADAATAL VELNRVLAER AVRTEGFHTA DVKRRLDEAL EPPAEYHREP
GLLDPREAIR VLDSDLPGEI GLVLGSGHQT DFGTMLFQRS REVLSNYGMF GAIGQAPLLT
IGSIIADGNK PAFVVEGDAS FLMHLSEFET AVRYGVPILV VVMNDEGLGA EYHKAAAKGL
DPNLAVISTP ELGGVAEALG GSGATVRTVE ELKAALARYV AAPGPTVIDV RITREVLSIP
YRRLQYGEDV
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