| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3873 |
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| Symbol | |
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| ID | 8335226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4384416 |
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| End bp | 4386011 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957002 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_003114605 |
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| Protein GI | 256393041 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0464732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0452112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGACA TTGTCGAGAT TTTCGTCCAC TGGTATGCGG GCCGTTCCAA GAGCGAGGTG
GCCACGTCGC TGGGGGTGGA TCCGAAGACG GTTCGGAAGT ATCTGAAGCC AGCCGAGCGG
TCTGGGATCG TGCCGGGCGG CCCGCCGATG GCCGAGGAGG ACTGGTCGAA GCTGATCCGC
AGCTGGTTCC CGGAGATGAC CGACCGCACG CTGCGGCAGA TCACCTGGGG TGATATCGAT
CCGCACCGGG AGTTCGTGAA GGACCTGCTG GGGACGGTGA ACATGTCCAC GATCCACCAG
CGGCTGCGCG ATGAGCGGGG CCTGACGGTG TCGGTGGCCA CCTTCCGTCG CTGGGTGCAT
GCCACGATGC CGGAGCAGGC CGACCGGGCG AAGGTGACGG TGCTGCGCGA CGAGGTCGAG
CCAGGCTCCG AGGCGCAGAT CGACTACGGG TTCCTGGGGC AGTGGACGAA CCCGCGCTCT
GGGAAACGGC ACCGGGTCTG GGCGTTCGTG ATGGTGCTGC CGTGCTCGCG GCACATGTTC
GTGCGGCCAG TGTTGAGCAT GGACCAGCAC TCCTGGACCG AGGCGCATGT CGCGGCGTTC
GAGTTCTTCG GCGGGGTGCC CAAGCGCCTG ATCCCGGACA ACCTGAAAAC CGGAGTCGAC
AAGCCCGACC TCTACGACCC GAAGATCAAC CGGGCGTATG CCGAGCTGGC GGCGCACTAC
GGGGCGCTGG TGGACCCGGC CCGCGCGGTG AAGCCGAAGG ACAAGCCCAG AGTCGAAAGA
CAGATGCCCT ATATCCGGGA CTCTTGGTGG GCCGGTCGGG AGTTCGCCTC GATCGAGCAG
ATGCAGGCCG ATGCCGTGGC GTGGTCGACG ACGGTCGCCG GGCGAAGGGC ATGCCGGCCG
CTGGGCGGCG CCTCGCCGAT CTCGGTGTTC GAGGCCGCCG AGGCGCAGAT ACTGCTGCCG
CTGCCGCAGG CCTCGTTCAC GCTCGCGCGC TGGTCGACGG CCACGGTCGG GCCGGACATC
CACATCCGCG TGGGCCGCAC CCTGTATTCG GTGCCGTGGA AGCTGATCGG CCGCCGCGTC
GATGTTCGTT CGACGGCCAC GATGGTCCAG GTGTTCCTGG ACGGGGAGAT GGTGAAGACC
CACGCCGCGC TGGAGCAGGG CAAGCGCACC GACAAGAACG ACTACCCGCC GGAGAAGATC
GCCTTCCAGA TGCGGACCCC GGTCTGGTGC CGCACCCAGG CATCGGAGGT CGGCGACGCC
TGCCGCGAGC TGGTCGATGG CCTGCTGGAG GTCAACGCGC TCTACCGGTT GCGCGCGGCC
CAAGGCGTCG TCGGGCTGCG CAAGAAGTAC GGCGACCAGC GGCTGGAGGC GGCCTGCGCC
AAGGCGATCA CGGTCGGGGA CCCGTCCTAT CGCACGGTGA AGGGCGTCCT GATCGCCGGC
ACCGAGACCG ACCCCGAGCC GGAGACCGGC GACGCCGGGG CCGCGGCGTT CCTGCACGGC
CCGGCCGGGC TGTTCGCCGC TGACGCGGCC ATGGGGGTGA CGGACGACGT GGTCCATCCC
CAGATCAGCG ACGACGCCGA GGACGGTGCC CGATGA
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| Protein sequence | MVDIVEIFVH WYAGRSKSEV ATSLGVDPKT VRKYLKPAER SGIVPGGPPM AEEDWSKLIR
SWFPEMTDRT LRQITWGDID PHREFVKDLL GTVNMSTIHQ RLRDERGLTV SVATFRRWVH
ATMPEQADRA KVTVLRDEVE PGSEAQIDYG FLGQWTNPRS GKRHRVWAFV MVLPCSRHMF
VRPVLSMDQH SWTEAHVAAF EFFGGVPKRL IPDNLKTGVD KPDLYDPKIN RAYAELAAHY
GALVDPARAV KPKDKPRVER QMPYIRDSWW AGREFASIEQ MQADAVAWST TVAGRRACRP
LGGASPISVF EAAEAQILLP LPQASFTLAR WSTATVGPDI HIRVGRTLYS VPWKLIGRRV
DVRSTATMVQ VFLDGEMVKT HAALEQGKRT DKNDYPPEKI AFQMRTPVWC RTQASEVGDA
CRELVDGLLE VNALYRLRAA QGVVGLRKKY GDQRLEAACA KAITVGDPSY RTVKGVLIAG
TETDPEPETG DAGAAAFLHG PAGLFAADAA MGVTDDVVHP QISDDAEDGA R
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