Gene Caci_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3872 
Symbol 
ID8335225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4383628 
End bp4384419 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID644957001 
ProductIstB domain protein ATP-binding protein 
Protein accessionYP_003114604 
Protein GI256393040 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.33827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0551176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGA TCGGCAATGC CCTGCGCGAG TCGCTCAAGG CCCTGCGTCT GTCGGGGATG 
CTGGAGACCC TGGACGCCCG GCTCATCCAG GCCCACGGCG GGGAGCTCGG ACACCTGGAG
TTCCTGCAGG TGCTCTGCCA GGACAAGATC ACCCGCCGGG AGACCGTCGC GTTCCAGCGC
CGGCTGCAGA AGGCGCGGTT CGAGCAGCAG GTCACCTTGG AGGAGTTCGA CTTCAACGCC
TCCTCCAAGC TGCCCGCCGC CCAGATCCGA GACCTGTCCG CGTTGCGCTG GCTGCACGCC
GGAGAGTCGG TGATCCTGTT CGGGCCGGTC GGGGTCGGCA AGACACACGT CGCCCAAGGG
CTGGGACATC TCGCGGTCCG CCAAGGCGCA GCCGTCCAGT TCGCCAAGAC CAGCCGCGTG
CTGGCCGACC TGGCCGGCGG ACACGCCGAC CGCACCTGGG ACAAGCGCGT CCGGGAACTG
GTGCGGCCCG ACGTGCTCAT CCTCGACGAC TTCGCCATGC GCCAGATGAC CGCACCCCAG
GCCGACGACC TCTACGAGCT GGTCAGCGAA CGTCAGGGCC GCAGCCTGAT CATCACCAGC
AACCGTGCCC CGTCCGACTG GTATCCGCTG TTCCCGAACC CCGTCGTCGC CGAGTCACTC
CTGGACCGGC TGATCAACAC CAGCCACCAG GTCATCATGA ACGGCCCCAG CTACCGGCCC
AACAAGCGGC CCAAGAACTC CACCGACACG GTCCACACAC CCGAGACGCC CGCTGCCAAA
GTCAAGCGGT AA
 
Protein sequence
MNPIGNALRE SLKALRLSGM LETLDARLIQ AHGGELGHLE FLQVLCQDKI TRRETVAFQR 
RLQKARFEQQ VTLEEFDFNA SSKLPAAQIR DLSALRWLHA GESVILFGPV GVGKTHVAQG
LGHLAVRQGA AVQFAKTSRV LADLAGGHAD RTWDKRVREL VRPDVLILDD FAMRQMTAPQ
ADDLYELVSE RQGRSLIITS NRAPSDWYPL FPNPVVAESL LDRLINTSHQ VIMNGPSYRP
NKRPKNSTDT VHTPETPAAK VKR