Gene Caci_3850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3850 
Symbol 
ID8335203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4362857 
End bp4363648 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID644956985 
ProductAntibiotic biosynthesis monooxygenase 
Protein accessionYP_003114588 
Protein GI256393024 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000122426 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0184241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG AATACATCCG TTACCTGATA CCCGCTGACA GCAGCGAGCA GTTCGAGTCC 
GCCTATGCCC GCGCCGCCTC AGCCTCGCTC GCCGTGGCCC CGCAGTGTGT GGAATATGAA
CTGGCCCGCT GCACGGAAGC TCCCGACCAC TACATCCTGC GCATCGTCTG GACCTCCGCG
GACGACCATC TGCACGGCTT CCGCGGCGGC CCGCACTTCG CGGCCTTCTT CGCCGAGATC
AAGCCCTACG TGACGGCGAT CGAGGAGATG CGGCACTACG AGCGCACCGC CGTGCGCGGC
CAGGGCGGAT CGGTTCCGAC CATGTTCGAC TGGCTCGGCG GCGCCAAAGC CCTGGAGCGC
CTGACAGACG TGTTCTACGA CCACGTCCTG GCCGACGAGG TGGTCGGGCC GCTGTTCGCG
CACATGGACC CGGCCCATCC ACACCACGTC GCACTGTGGT TGGGCGAGGT ATTCGGCGGT
CCGTCGCGCT ACACCGCCGA ACGCGGTGGC TATCACCACA TGATCACCCA GCACCTCGGC
AAGGCCATCA CCGAACCGCA GCGCCGCCGC TGGACCAACC TTCTGATGGA CGCCGCCGAC
GAGGTGGACC TGCCGTCCGA CCCGGAGTTC CGCGCGGCTT TCGCCTCCTA CATCGAGTGG
GGCACCCGCC TGGCGCTGAC CAACTCCCAG CCCGGCGCGA CCCCCTTCAC CCATGCACGG
GTCCCGCACT GGGAATGGGG CGCCGGCATC ACCCCGCCCT ACCGGTCCGC CGCATCCAAG
GCCGCGTCAT GA
 
Protein sequence
MIVEYIRYLI PADSSEQFES AYARAASASL AVAPQCVEYE LARCTEAPDH YILRIVWTSA 
DDHLHGFRGG PHFAAFFAEI KPYVTAIEEM RHYERTAVRG QGGSVPTMFD WLGGAKALER
LTDVFYDHVL ADEVVGPLFA HMDPAHPHHV ALWLGEVFGG PSRYTAERGG YHHMITQHLG
KAITEPQRRR WTNLLMDAAD EVDLPSDPEF RAAFASYIEW GTRLALTNSQ PGATPFTHAR
VPHWEWGAGI TPPYRSAASK AAS